Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC8P31273 AC099343.3-201ENST00000605834 2503 ntBASIC20.06■□□□□ 0.8
HOXC8P31273 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC8P31273 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC8P31273 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.05■□□□□ 0.8
HOXC8P31273 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC8P31273 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC8P31273 AC125634.1-201ENST00000438758 1403 ntBASIC20.05■□□□□ 0.8
HOXC8P31273 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC8P31273 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC8P31273 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.05■□□□□ 0.8
HOXC8P31273 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC8P31273 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HOXC8P31273 AC079776.4-201ENST00000511039 504 ntBASIC20.05■□□□□ 0.8
HOXC8P31273 AP001005.1-201ENST00000571755 1248 ntBASIC20.05■□□□□ 0.8
HOXC8P31273 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC8P31273 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC8P31273 AC011467.2-201ENST00000598425 242 ntBASIC20.05■□□□□ 0.8
HOXC8P31273 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.05■□□□□ 0.8
HOXC8P31273 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
HOXC8P31273 INTS4P1-201ENST00000438455 1935 ntBASIC20.05■□□□□ 0.8
HOXC8P31273 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC8P31273 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.05■□□□□ 0.8
HOXC8P31273 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC8P31273 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC8P31273 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC8P31273 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC8P31273 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.05■□□□□ 0.8
HOXC8P31273 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC8P31273 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC8P31273 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC8P31273 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HOXC8P31273 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXC8P31273 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC8P31273 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXC8P31273 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC8P31273 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HOXC8P31273 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC8P31273 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.04■□□□□ 0.8
HOXC8P31273 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXC8P31273 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.04■□□□□ 0.8
HOXC8P31273 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.04■□□□□ 0.8
HOXC8P31273 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXC8P31273 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.04■□□□□ 0.8
HOXC8P31273 RBM17P3-201ENST00000417687 1192 ntBASIC20.04■□□□□ 0.8
HOXC8P31273 AL590627.1-203ENST00000421194 1026 ntBASIC20.04■□□□□ 0.8
HOXC8P31273 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.04■□□□□ 0.8
HOXC8P31273 FGFR3P6-201ENST00000457012 610 ntBASIC20.04■□□□□ 0.8
HOXC8P31273 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXC8P31273 AC009533.2-201ENST00000543664 586 ntBASIC20.04■□□□□ 0.8
HOXC8P31273 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.04■□□□□ 0.8
HOXC8P31273 AC008608.2-201ENST00000606089 416 ntBASIC20.04■□□□□ 0.8
HOXC8P31273 AC120114.3-201ENST00000611923 658 ntBASIC20.04■□□□□ 0.8
HOXC8P31273 AC148477.8-201ENST00000624298 468 ntBASIC20.04■□□□□ 0.8
HOXC8P31273 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.04■□□□□ 0.8
HOXC8P31273 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC8P31273 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC8P31273 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
HOXC8P31273 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.04■□□□□ 0.8
HOXC8P31273 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC8P31273 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
HOXC8P31273 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC8P31273 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC8P31273 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXC8P31273 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXC8P31273 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXC8P31273 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXC8P31273 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXC8P31273 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXC8P31273 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
HOXC8P31273 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXC8P31273 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXC8P31273 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
HOXC8P31273 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXC8P31273 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXC8P31273 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXC8P31273 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXC8P31273 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.03■□□□□ 0.8
HOXC8P31273 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXC8P31273 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.03■□□□□ 0.8
HOXC8P31273 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HOXC8P31273 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HOXC8P31273 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HOXC8P31273 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXC8P31273 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXC8P31273 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.02■□□□□ 0.8
HOXC8P31273 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXC8P31273 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.02■□□□□ 0.8
HOXC8P31273 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.02■□□□□ 0.8
HOXC8P31273 AL031284.1-201ENST00000419297 478 ntBASIC20.02■□□□□ 0.8
HOXC8P31273 KRT18P65-201ENST00000439811 1286 ntBASIC20.02■□□□□ 0.8
HOXC8P31273 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.02■□□□□ 0.8
HOXC8P31273 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
HOXC8P31273 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HOXC8P31273 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.02■□□□□ 0.8
HOXC8P31273 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.02■□□□□ 0.8
HOXC8P31273 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HOXC8P31273 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXC8P31273 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXC8P31273 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms