Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.65■□□□□ 0.1
HIST1H1DP16402 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1DP16402 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1DP16402 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1DP16402 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1DP16402 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1DP16402 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HIST1H1DP16402 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.65■□□□□ 0.1
HIST1H1DP16402 AC004951.3-201ENST00000418645 1148 ntBASIC15.65■□□□□ 0.1
HIST1H1DP16402 NIFKP9-201ENST00000419265 221 ntBASIC15.65■□□□□ 0.1
HIST1H1DP16402 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.65■□□□□ 0.1
HIST1H1DP16402 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HIST1H1DP16402 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1DP16402 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1DP16402 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1DP16402 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.65■□□□□ 0.1
HIST1H1DP16402 AL096828.2-201ENST00000567259 1965 ntBASIC15.65■□□□□ 0.1
HIST1H1DP16402 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1DP16402 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.65■□□□□ 0.1
HIST1H1DP16402 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.65■□□□□ 0.1
HIST1H1DP16402 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1DP16402 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HIST1H1DP16402 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.65■□□□□ 0.1
HIST1H1DP16402 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.65■□□□□ 0.1
HIST1H1DP16402 PRORSD1P-202ENST00000563365 2154 ntBASIC15.65■□□□□ 0.1
HIST1H1DP16402 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.65■□□□□ 0.1
HIST1H1DP16402 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1DP16402 SIRPAP1-201ENST00000448467 1770 ntBASIC15.64■□□□□ 0.1
HIST1H1DP16402 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1DP16402 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1DP16402 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1DP16402 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1DP16402 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HIST1H1DP16402 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1DP16402 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
HIST1H1DP16402 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.64■□□□□ 0.09
HIST1H1DP16402 AC139713.2-201ENST00000641328 2723 ntBASIC15.64■□□□□ 0.09
HIST1H1DP16402 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1DP16402 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1DP16402 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1DP16402 AP000593.1-201ENST00000393668 712 ntBASIC15.64■□□□□ 0.09
HIST1H1DP16402 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.64■□□□□ 0.09
HIST1H1DP16402 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1DP16402 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.64■□□□□ 0.09
HIST1H1DP16402 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HIST1H1DP16402 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1DP16402 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.64■□□□□ 0.09
HIST1H1DP16402 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.64■□□□□ 0.09
HIST1H1DP16402 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
HIST1H1DP16402 AC233263.1-201ENST00000578059 224 ntBASIC15.64■□□□□ 0.09
HIST1H1DP16402 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.64■□□□□ 0.09
HIST1H1DP16402 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1DP16402 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.64■□□□□ 0.09
HIST1H1DP16402 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1DP16402 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1DP16402 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.64■□□□□ 0.09
HIST1H1DP16402 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.64■□□□□ 0.09
HIST1H1DP16402 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1DP16402 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.64■□□□□ 0.09
HIST1H1DP16402 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
HIST1H1DP16402 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1DP16402 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1DP16402 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.64■□□□□ 0.09
HIST1H1DP16402 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1DP16402 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
HIST1H1DP16402 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.63■□□□□ 0.09
HIST1H1DP16402 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HIST1H1DP16402 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.63■□□□□ 0.09
HIST1H1DP16402 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HIST1H1DP16402 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HIST1H1DP16402 GMCL1P1-201ENST00000463439 1581 ntBASIC15.63■□□□□ 0.09
HIST1H1DP16402 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HIST1H1DP16402 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HIST1H1DP16402 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HIST1H1DP16402 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HIST1H1DP16402 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
HIST1H1DP16402 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HIST1H1DP16402 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
HIST1H1DP16402 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.63■□□□□ 0.09
HIST1H1DP16402 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.63■□□□□ 0.09
HIST1H1DP16402 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HIST1H1DP16402 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HIST1H1DP16402 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.63■□□□□ 0.09
HIST1H1DP16402 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.63■□□□□ 0.09
HIST1H1DP16402 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HIST1H1DP16402 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HIST1H1DP16402 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
HIST1H1DP16402 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.63■□□□□ 0.09
HIST1H1DP16402 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HIST1H1DP16402 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HIST1H1DP16402 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HIST1H1DP16402 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
HIST1H1DP16402 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HIST1H1DP16402 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.63■□□□□ 0.09
HIST1H1DP16402 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
HIST1H1DP16402 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIST1H1DP16402 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HIST1H1DP16402 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIST1H1DP16402 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIST1H1DP16402 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms