Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.49■□□□□ 0.55
THRAP10827 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
THRAP10827 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.49■□□□□ 0.55
THRAP10827 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.49■□□□□ 0.55
THRAP10827 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
THRAP10827 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
THRAP10827 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
THRAP10827 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.48■□□□□ 0.55
THRAP10827 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.48■□□□□ 0.55
THRAP10827 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
THRAP10827 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.48■□□□□ 0.55
THRAP10827 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.48■□□□□ 0.55
THRAP10827 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.48■□□□□ 0.55
THRAP10827 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.48■□□□□ 0.55
THRAP10827 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 CA15P1-201ENST00000481698 905 ntBASIC18.48■□□□□ 0.55
THRAP10827 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.48■□□□□ 0.55
THRAP10827 AC022616.7-201ENST00000525383 220 ntBASIC18.48■□□□□ 0.55
THRAP10827 AL353719.1-201ENST00000566847 864 ntBASIC18.48■□□□□ 0.55
THRAP10827 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.48■□□□□ 0.55
THRAP10827 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
THRAP10827 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.48■□□□□ 0.55
THRAP10827 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
THRAP10827 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
THRAP10827 ANO7L1-203ENST00000602586 1720 ntBASIC18.48■□□□□ 0.55
THRAP10827 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
THRAP10827 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THRAP10827 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.48■□□□□ 0.55
THRAP10827 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.47■□□□□ 0.55
THRAP10827 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
THRAP10827 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
THRAP10827 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
THRAP10827 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.47■□□□□ 0.55
THRAP10827 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
THRAP10827 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
THRAP10827 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.47■□□□□ 0.55
THRAP10827 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
THRAP10827 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
THRAP10827 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
THRAP10827 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
THRAP10827 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.47■□□□□ 0.55
THRAP10827 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
THRAP10827 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.47■□□□□ 0.55
THRAP10827 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.47■□□□□ 0.55
THRAP10827 AC063952.2-201ENST00000498792 1227 ntBASIC18.47■□□□□ 0.55
THRAP10827 CKBP1-201ENST00000565489 1086 ntBASIC18.47■□□□□ 0.55
THRAP10827 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
THRAP10827 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
THRAP10827 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
THRAP10827 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
THRAP10827 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
THRAP10827 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
THRAP10827 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.47■□□□□ 0.55
THRAP10827 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
THRAP10827 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
THRAP10827 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.47■□□□□ 0.55
THRAP10827 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
THRAP10827 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THRAP10827 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.46■□□□□ 0.55
THRAP10827 FEM1AP3-201ENST00000403722 1741 ntBASIC18.46■□□□□ 0.55
THRAP10827 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
THRAP10827 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
THRAP10827 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THRAP10827 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.46■□□□□ 0.55
THRAP10827 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THRAP10827 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.46■□□□□ 0.55
THRAP10827 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THRAP10827 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THRAP10827 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THRAP10827 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
THRAP10827 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.46■□□□□ 0.55
THRAP10827 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
THRAP10827 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.46■□□□□ 0.55
THRAP10827 LINC01238-205ENST00000567549 1107 ntBASIC18.46■□□□□ 0.55
THRAP10827 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THRAP10827 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.46■□□□□ 0.55
THRAP10827 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.46■□□□□ 0.55
THRAP10827 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
THRAP10827 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.46■□□□□ 0.55
THRAP10827 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms