Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.31■□□□□ 0.04
CTSDP07339 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CTSDP07339 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 TSPY6P-201ENST00000448518 926 ntBASIC15.31■□□□□ 0.04
CTSDP07339 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.31■□□□□ 0.04
CTSDP07339 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.31■□□□□ 0.04
CTSDP07339 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSDP07339 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 AL109923.1-201ENST00000618799 583 ntBASIC15.31■□□□□ 0.04
CTSDP07339 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
CTSDP07339 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSDP07339 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSDP07339 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 RCC2P3-201ENST00000418112 1537 ntBASIC15.31■□□□□ 0.04
CTSDP07339 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.31■□□□□ 0.04
CTSDP07339 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CTSDP07339 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.3■□□□□ 0.04
CTSDP07339 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.3■□□□□ 0.04
CTSDP07339 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CTSDP07339 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.3■□□□□ 0.04
CTSDP07339 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CTSDP07339 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.3■□□□□ 0.04
CTSDP07339 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 GMCL1P1-201ENST00000463439 1581 ntBASIC15.3■□□□□ 0.04
CTSDP07339 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.3■□□□□ 0.04
CTSDP07339 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.3■□□□□ 0.04
CTSDP07339 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.3■□□□□ 0.04
CTSDP07339 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.3■□□□□ 0.04
CTSDP07339 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CTSDP07339 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CTSDP07339 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTSDP07339 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.3■□□□□ 0.04
CTSDP07339 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CTSDP07339 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CTSDP07339 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTSDP07339 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTSDP07339 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.29■□□□□ 0.04
CTSDP07339 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTSDP07339 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.29■□□□□ 0.04
CTSDP07339 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CTSDP07339 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTSDP07339 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTSDP07339 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTSDP07339 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTSDP07339 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTSDP07339 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.29■□□□□ 0.04
CTSDP07339 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTSDP07339 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CTSDP07339 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.29■□□□□ 0.04
CTSDP07339 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.29■□□□□ 0.04
CTSDP07339 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.29■□□□□ 0.04
CTSDP07339 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.29■□□□□ 0.04
CTSDP07339 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTSDP07339 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTSDP07339 AC108860.2-201ENST00000562760 2183 ntBASIC15.29■□□□□ 0.04
CTSDP07339 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTSDP07339 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTSDP07339 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTSDP07339 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.29■□□□□ 0.04
CTSDP07339 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.29■□□□□ 0.04
CTSDP07339 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CTSDP07339 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTSDP07339 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CTSDP07339 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms