Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRAP04437 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRAP04437 AC009053.2-201ENST00000563701 2365 ntBASIC14.04□□□□□ -0.16
TCRAP04437 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRAP04437 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRAP04437 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRAP04437 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
TCRAP04437 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TCRAP04437 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRAP04437 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRAP04437 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRAP04437 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.04□□□□□ -0.16
TCRAP04437 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRAP04437 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRAP04437 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRAP04437 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRAP04437 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.04□□□□□ -0.16
TCRAP04437 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRAP04437 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TCRAP04437 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TCRAP04437 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.03□□□□□ -0.16
TCRAP04437 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.03□□□□□ -0.16
TCRAP04437 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TCRAP04437 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.03□□□□□ -0.16
TCRAP04437 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.03□□□□□ -0.16
TCRAP04437 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.03□□□□□ -0.16
TCRAP04437 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.03□□□□□ -0.16
TCRAP04437 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.03□□□□□ -0.16
TCRAP04437 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.03□□□□□ -0.16
TCRAP04437 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.03□□□□□ -0.16
TCRAP04437 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.03□□□□□ -0.16
TCRAP04437 HTR7P1-201ENST00000538670 1336 ntBASIC14.03□□□□□ -0.16
TCRAP04437 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.03□□□□□ -0.16
TCRAP04437 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 RCC2P3-201ENST00000418112 1537 ntBASIC14.03□□□□□ -0.16
TCRAP04437 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TCRAP04437 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TCRAP04437 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.03□□□□□ -0.16
TCRAP04437 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRAP04437 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TCRAP04437 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRAP04437 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TCRAP04437 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRAP04437 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TCRAP04437 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRAP04437 AL645608.8-201ENST00000606034 2086 ntBASIC14.02□□□□□ -0.16
TCRAP04437 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRAP04437 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.02□□□□□ -0.16
TCRAP04437 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRAP04437 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRAP04437 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TCRAP04437 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRAP04437 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRAP04437 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRAP04437 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TCRAP04437 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.02□□□□□ -0.16
TCRAP04437 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRAP04437 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRAP04437 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.02□□□□□ -0.17
TCRAP04437 POM121L13P-201ENST00000422362 380 ntBASIC14.02□□□□□ -0.17
TCRAP04437 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TCRAP04437 GUSBP6-202ENST00000438529 1198 ntBASIC14.02□□□□□ -0.17
TCRAP04437 TSPY6P-201ENST00000448518 926 ntBASIC14.02□□□□□ -0.17
TCRAP04437 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRAP04437 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.02□□□□□ -0.17
TCRAP04437 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.02□□□□□ -0.17
TCRAP04437 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.02□□□□□ -0.17
TCRAP04437 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.02□□□□□ -0.17
TCRAP04437 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.02□□□□□ -0.17
TCRAP04437 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.02□□□□□ -0.17
TCRAP04437 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.02□□□□□ -0.17
TCRAP04437 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
TCRAP04437 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TCRAP04437 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRAP04437 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
TCRAP04437 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.02□□□□□ -0.17
TCRAP04437 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRAP04437 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRAP04437 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRAP04437 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRAP04437 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRAP04437 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TCRAP04437 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms