Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CECR7-204ENST00000609932 568 ntTSL 2 BASIC31.38■■■□□ 2.61
CUX2O14529 AP000867.4-201ENST00000641616 219 ntBASIC31.38■■■□□ 2.61
CUX2O14529 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC31.38■■■□□ 2.61
CUX2O14529 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC31.38■■■□□ 2.61
CUX2O14529 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC31.38■■■□□ 2.61
CUX2O14529 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC31.38■■■□□ 2.61
CUX2O14529 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CUX2O14529 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CUX2O14529 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC31.37■■■□□ 2.61
CUX2O14529 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC31.37■■■□□ 2.61
CUX2O14529 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC31.37■■■□□ 2.61
CUX2O14529 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CUX2O14529 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CUX2O14529 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC31.37■■■□□ 2.61
CUX2O14529 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC31.37■■■□□ 2.61
CUX2O14529 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC31.37■■■□□ 2.61
CUX2O14529 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CUX2O14529 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CUX2O14529 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC31.37■■■□□ 2.61
CUX2O14529 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC31.37■■■□□ 2.61
CUX2O14529 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CUX2O14529 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CUX2O14529 AC007375.3-201ENST00000600936 2314 ntBASIC31.36■■■□□ 2.61
CUX2O14529 GRAP-202ENST00000395635 834 ntTSL 2 BASIC31.36■■■□□ 2.61
CUX2O14529 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CUX2O14529 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC31.36■■■□□ 2.61
CUX2O14529 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC31.36■■■□□ 2.61
CUX2O14529 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC31.36■■■□□ 2.61
CUX2O14529 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
CUX2O14529 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC31.36■■■□□ 2.61
CUX2O14529 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CUX2O14529 REEP1-209ENST00000541910 969 ntTSL 2 BASIC31.36■■■□□ 2.61
CUX2O14529 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC31.36■■■□□ 2.61
CUX2O14529 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
CUX2O14529 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CUX2O14529 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CUX2O14529 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CUX2O14529 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CUX2O14529 RCC2P3-201ENST00000418112 1537 ntBASIC31.36■■■□□ 2.61
CUX2O14529 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CUX2O14529 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
CUX2O14529 CLDN5-201ENST00000403084 2357 ntBASIC31.36■■■□□ 2.61
CUX2O14529 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
CUX2O14529 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CUX2O14529 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CUX2O14529 AC073621.1-201ENST00000392730 636 ntBASIC31.35■■■□□ 2.61
CUX2O14529 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
CUX2O14529 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC31.35■■■□□ 2.61
CUX2O14529 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC31.35■■■□□ 2.61
CUX2O14529 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC31.35■■■□□ 2.61
CUX2O14529 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CUX2O14529 AC097374.2-201ENST00000618617 1306 ntBASIC31.35■■■□□ 2.61
CUX2O14529 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC31.35■■■□□ 2.61
CUX2O14529 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CUX2O14529 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CUX2O14529 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
CUX2O14529 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CUX2O14529 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CUX2O14529 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CUX2O14529 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CUX2O14529 ENSA-205ENST00000361532 792 ntTSL 2 BASIC31.34■■■□□ 2.61
CUX2O14529 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CUX2O14529 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CUX2O14529 AC002472.2-201ENST00000442739 958 ntBASIC31.34■■■□□ 2.61
CUX2O14529 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CUX2O14529 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CUX2O14529 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
CUX2O14529 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
CUX2O14529 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC31.34■■■□□ 2.61
CUX2O14529 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CUX2O14529 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
CUX2O14529 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CUX2O14529 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CUX2O14529 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC31.33■■■□□ 2.61
CUX2O14529 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC31.33■■■□□ 2.61
CUX2O14529 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CUX2O14529 NKAPP1-205ENST00000585790 367 ntBASIC31.33■■■□□ 2.61
CUX2O14529 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CUX2O14529 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
CUX2O14529 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CUX2O14529 GPR89P-201ENST00000407924 1495 ntBASIC31.33■■■□□ 2.61
CUX2O14529 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CUX2O14529 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CUX2O14529 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CUX2O14529 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CUX2O14529 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC31.33■■■□□ 2.61
CUX2O14529 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC31.33■■■□□ 2.61
CUX2O14529 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CUX2O14529 FUOM-202ENST00000368551 628 ntTSL 3 BASIC31.33■■■□□ 2.61
CUX2O14529 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC31.33■■■□□ 2.61
CUX2O14529 CBR1-202ENST00000399191 838 ntTSL 3 BASIC31.33■■■□□ 2.61
CUX2O14529 AC236430.1-201ENST00000402231 743 ntBASIC31.33■■■□□ 2.61
CUX2O14529 RNA5SP421-201ENST00000516864 134 ntBASIC31.33■■■□□ 2.61
CUX2O14529 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
CUX2O14529 AC004449.1-201ENST00000564240 433 ntBASIC31.33■■■□□ 2.61
CUX2O14529 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
CUX2O14529 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
CUX2O14529 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC31.32■■■□□ 2.6
CUX2O14529 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
CUX2O14529 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms