Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.99■□□□□ 0.47
C4orf47A7E2U8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 MTDHP3-201ENST00000594186 672 ntBASIC17.99■□□□□ 0.47
C4orf47A7E2U8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 AL356488.2-201ENST00000602755 427 ntBASIC17.99■□□□□ 0.47
C4orf47A7E2U8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 AC006333.2-201ENST00000607957 2099 ntBASIC17.99■□□□□ 0.47
C4orf47A7E2U8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C4orf47A7E2U8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C4orf47A7E2U8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
C4orf47A7E2U8 RPSAP43-201ENST00000402237 625 ntBASIC17.97■□□□□ 0.47
C4orf47A7E2U8 MED15P5-201ENST00000423150 992 ntBASIC17.97■□□□□ 0.47
C4orf47A7E2U8 FGFR3P6-201ENST00000457012 610 ntBASIC17.97■□□□□ 0.47
C4orf47A7E2U8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.97■□□□□ 0.47
C4orf47A7E2U8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
C4orf47A7E2U8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.97■□□□□ 0.47
C4orf47A7E2U8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.97■□□□□ 0.47
C4orf47A7E2U8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C4orf47A7E2U8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C4orf47A7E2U8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C4orf47A7E2U8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C4orf47A7E2U8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.97■□□□□ 0.47
C4orf47A7E2U8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.97■□□□□ 0.47
C4orf47A7E2U8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 KRT89P-201ENST00000620027 1478 ntBASIC17.96■□□□□ 0.47
C4orf47A7E2U8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 AC145285.3-201ENST00000564603 959 ntBASIC17.96■□□□□ 0.47
C4orf47A7E2U8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.96■□□□□ 0.47
C4orf47A7E2U8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
C4orf47A7E2U8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
C4orf47A7E2U8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C4orf47A7E2U8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C4orf47A7E2U8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
C4orf47A7E2U8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
C4orf47A7E2U8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
C4orf47A7E2U8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms