Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 CROCCP5-201ENST00000436658 830 ntBASIC16.07■□□□□ 0.16
SHISA3A0PJX4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 IKBKGP1-201ENST00000612193 1073 ntBASIC16.07■□□□□ 0.16
SHISA3A0PJX4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 AC018695.7-201ENST00000624587 2492 ntBASIC16.07■□□□□ 0.16
SHISA3A0PJX4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.07■□□□□ 0.16
SHISA3A0PJX4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.06■□□□□ 0.16
SHISA3A0PJX4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 GMCL1P1-201ENST00000463439 1581 ntBASIC16.05■□□□□ 0.16
SHISA3A0PJX4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 GUSBP6-202ENST00000438529 1198 ntBASIC16.05■□□□□ 0.16
SHISA3A0PJX4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms