Protein–RNA interactions for Protein: Q9EQ46

Vmn1r40, Vomeronasal type-1 receptor 40, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r40Q9EQ46 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.69■■□□□ 1.06
Vmn1r40Q9EQ46 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.69■■□□□ 1.06
Vmn1r40Q9EQ46 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vmn1r40Q9EQ46 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vmn1r40Q9EQ46 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vmn1r40Q9EQ46 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vmn1r40Q9EQ46 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Vmn1r40Q9EQ46 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Vmn1r40Q9EQ46 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r40Q9EQ46 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.66■■□□□ 1.06
Vmn1r40Q9EQ46 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r40Q9EQ46 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r40Q9EQ46 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r40Q9EQ46 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.65■■□□□ 1.06
Vmn1r40Q9EQ46 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Vmn1r40Q9EQ46 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.65■■□□□ 1.06
Vmn1r40Q9EQ46 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vmn1r40Q9EQ46 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.64■■□□□ 1.05
Vmn1r40Q9EQ46 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r40Q9EQ46 Gm44428-201ENSMUST00000204474 874 ntBASIC21.63■■□□□ 1.05
Vmn1r40Q9EQ46 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Vmn1r40Q9EQ46 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r40Q9EQ46 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r40Q9EQ46 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Vmn1r40Q9EQ46 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Vmn1r40Q9EQ46 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Vmn1r40Q9EQ46 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vmn1r40Q9EQ46 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Vmn1r40Q9EQ46 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r40Q9EQ46 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r40Q9EQ46 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.61■■□□□ 1.05
Vmn1r40Q9EQ46 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r40Q9EQ46 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r40Q9EQ46 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Vmn1r40Q9EQ46 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.6■■□□□ 1.05
Vmn1r40Q9EQ46 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r40Q9EQ46 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.59■■□□□ 1.05
Vmn1r40Q9EQ46 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.59■■□□□ 1.05
Vmn1r40Q9EQ46 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r40Q9EQ46 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Vmn1r40Q9EQ46 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vmn1r40Q9EQ46 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.58■■□□□ 1.04
Vmn1r40Q9EQ46 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.57■■□□□ 1.04
Vmn1r40Q9EQ46 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r40Q9EQ46 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r40Q9EQ46 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.56■■□□□ 1.04
Vmn1r40Q9EQ46 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
Vmn1r40Q9EQ46 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r40Q9EQ46 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r40Q9EQ46 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.55■■□□□ 1.04
Vmn1r40Q9EQ46 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.55■■□□□ 1.04
Vmn1r40Q9EQ46 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vmn1r40Q9EQ46 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vmn1r40Q9EQ46 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Vmn1r40Q9EQ46 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.55■■□□□ 1.04
Vmn1r40Q9EQ46 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vmn1r40Q9EQ46 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r40Q9EQ46 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r40Q9EQ46 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r40Q9EQ46 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Vmn1r40Q9EQ46 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r40Q9EQ46 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r40Q9EQ46 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.53■■□□□ 1.04
Vmn1r40Q9EQ46 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r40Q9EQ46 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r40Q9EQ46 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r40Q9EQ46 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.52■■□□□ 1.04
Vmn1r40Q9EQ46 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vmn1r40Q9EQ46 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vmn1r40Q9EQ46 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vmn1r40Q9EQ46 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vmn1r40Q9EQ46 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vmn1r40Q9EQ46 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Vmn1r40Q9EQ46 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vmn1r40Q9EQ46 Gm10420-201ENSMUST00000121713 882 ntBASIC21.51■■□□□ 1.03
Vmn1r40Q9EQ46 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vmn1r40Q9EQ46 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vmn1r40Q9EQ46 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r40Q9EQ46 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r40Q9EQ46 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.5■■□□□ 1.03
Vmn1r40Q9EQ46 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r40Q9EQ46 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r40Q9EQ46 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r40Q9EQ46 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r40Q9EQ46 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vmn1r40Q9EQ46 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vmn1r40Q9EQ46 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Vmn1r40Q9EQ46 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Vmn1r40Q9EQ46 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vmn1r40Q9EQ46 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vmn1r40Q9EQ46 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vmn1r40Q9EQ46 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vmn1r40Q9EQ46 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vmn1r40Q9EQ46 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vmn1r40Q9EQ46 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vmn1r40Q9EQ46 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vmn1r40Q9EQ46 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vmn1r40Q9EQ46 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.47■■□□□ 1.03
Vmn1r40Q9EQ46 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.47■■□□□ 1.03
Vmn1r40Q9EQ46 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms