Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.61■■□□□ 1.05
Nkx6-1Q99MA9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nkx6-1Q99MA9 Gm13238-201ENSMUST00000117655 780 ntBASIC21.6■■□□□ 1.05
Nkx6-1Q99MA9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.6■■□□□ 1.05
Nkx6-1Q99MA9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nkx6-1Q99MA9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Nkx6-1Q99MA9 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.59■■□□□ 1.05
Nkx6-1Q99MA9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nkx6-1Q99MA9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nkx6-1Q99MA9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Nkx6-1Q99MA9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.58■■□□□ 1.05
Nkx6-1Q99MA9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nkx6-1Q99MA9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Nkx6-1Q99MA9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Nkx6-1Q99MA9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Nkx6-1Q99MA9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Nkx6-1Q99MA9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.57■■□□□ 1.04
Nkx6-1Q99MA9 Zxda-201ENSMUST00000117281 2621 ntBASIC21.57■■□□□ 1.04
Nkx6-1Q99MA9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx6-1Q99MA9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
Nkx6-1Q99MA9 Gm14117-201ENSMUST00000122417 843 ntBASIC21.56■■□□□ 1.04
Nkx6-1Q99MA9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx6-1Q99MA9 Gm43566-201ENSMUST00000196851 808 ntBASIC21.56■■□□□ 1.04
Nkx6-1Q99MA9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.56■■□□□ 1.04
Nkx6-1Q99MA9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx6-1Q99MA9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nkx6-1Q99MA9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nkx6-1Q99MA9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.55■■□□□ 1.04
Nkx6-1Q99MA9 Gm45102-201ENSMUST00000207427 857 ntBASIC21.55■■□□□ 1.04
Nkx6-1Q99MA9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nkx6-1Q99MA9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nkx6-1Q99MA9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Nkx6-1Q99MA9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Nkx6-1Q99MA9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Nkx6-1Q99MA9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx6-1Q99MA9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.54■■□□□ 1.04
Nkx6-1Q99MA9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.54■■□□□ 1.04
Nkx6-1Q99MA9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
Nkx6-1Q99MA9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Nkx6-1Q99MA9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nkx6-1Q99MA9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Nkx6-1Q99MA9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx6-1Q99MA9 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.51■■□□□ 1.03
Nkx6-1Q99MA9 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.5■■□□□ 1.03
Nkx6-1Q99MA9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nkx6-1Q99MA9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nkx6-1Q99MA9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nkx6-1Q99MA9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nkx6-1Q99MA9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nkx6-1Q99MA9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nkx6-1Q99MA9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nkx6-1Q99MA9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nkx6-1Q99MA9 Gm45444-201ENSMUST00000211394 898 ntBASIC21.48■■□□□ 1.03
Nkx6-1Q99MA9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx6-1Q99MA9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Nkx6-1Q99MA9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx6-1Q99MA9 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.47■■□□□ 1.03
Nkx6-1Q99MA9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx6-1Q99MA9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx6-1Q99MA9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Nkx6-1Q99MA9 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.46■■□□□ 1.03
Nkx6-1Q99MA9 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.46■■□□□ 1.03
Nkx6-1Q99MA9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Nkx6-1Q99MA9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.46■■□□□ 1.03
Nkx6-1Q99MA9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nkx6-1Q99MA9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nkx6-1Q99MA9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nkx6-1Q99MA9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nkx6-1Q99MA9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nkx6-1Q99MA9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nkx6-1Q99MA9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nkx6-1Q99MA9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.44■■□□□ 1.02
Nkx6-1Q99MA9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx6-1Q99MA9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.43■■□□□ 1.02
Nkx6-1Q99MA9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx6-1Q99MA9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx6-1Q99MA9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nkx6-1Q99MA9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.42■■□□□ 1.02
Nkx6-1Q99MA9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nkx6-1Q99MA9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Nkx6-1Q99MA9 Gm9959-201ENSMUST00000068277 390 ntBASIC21.42■■□□□ 1.02
Nkx6-1Q99MA9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Nkx6-1Q99MA9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nkx6-1Q99MA9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Nkx6-1Q99MA9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Nkx6-1Q99MA9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nkx6-1Q99MA9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.4■■□□□ 1.02
Nkx6-1Q99MA9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Nkx6-1Q99MA9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.4■■□□□ 1.02
Nkx6-1Q99MA9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nkx6-1Q99MA9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Nkx6-1Q99MA9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.02
Nkx6-1Q99MA9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nkx6-1Q99MA9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.39■■□□□ 1.01
Nkx6-1Q99MA9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nkx6-1Q99MA9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Nkx6-1Q99MA9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.38■■□□□ 1.01
Nkx6-1Q99MA9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nkx6-1Q99MA9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nkx6-1Q99MA9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms