Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.72■■□□□ 1.23
Pcdhgb5Q91XX5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgb5Q91XX5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhgb5Q91XX5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhgb5Q91XX5 Gm44428-201ENSMUST00000204474 874 ntBASIC22.71■■□□□ 1.23
Pcdhgb5Q91XX5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Pcdhgb5Q91XX5 Amer2-203ENSMUST00000225247 2662 ntBASIC22.7■■□□□ 1.22
Pcdhgb5Q91XX5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgb5Q91XX5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgb5Q91XX5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgb5Q91XX5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgb5Q91XX5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgb5Q91XX5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgb5Q91XX5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.69■■□□□ 1.22
Pcdhgb5Q91XX5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgb5Q91XX5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgb5Q91XX5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgb5Q91XX5 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.68■■□□□ 1.22
Pcdhgb5Q91XX5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.68■■□□□ 1.22
Pcdhgb5Q91XX5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.68■■□□□ 1.22
Pcdhgb5Q91XX5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.68■■□□□ 1.22
Pcdhgb5Q91XX5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhgb5Q91XX5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhgb5Q91XX5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhgb5Q91XX5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.66■■□□□ 1.22
Pcdhgb5Q91XX5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhgb5Q91XX5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhgb5Q91XX5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhgb5Q91XX5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhgb5Q91XX5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhgb5Q91XX5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhgb5Q91XX5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Pcdhgb5Q91XX5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhgb5Q91XX5 Gm5921-201ENSMUST00000075898 882 ntBASIC22.62■■□□□ 1.21
Pcdhgb5Q91XX5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhgb5Q91XX5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.62■■□□□ 1.21
Pcdhgb5Q91XX5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgb5Q91XX5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.61■■□□□ 1.21
Pcdhgb5Q91XX5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.61■■□□□ 1.21
Pcdhgb5Q91XX5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.61■■□□□ 1.21
Pcdhgb5Q91XX5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgb5Q91XX5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgb5Q91XX5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgb5Q91XX5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Pcdhgb5Q91XX5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb5Q91XX5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb5Q91XX5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb5Q91XX5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Pcdhgb5Q91XX5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb5Q91XX5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb5Q91XX5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhgb5Q91XX5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhgb5Q91XX5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgb5Q91XX5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgb5Q91XX5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgb5Q91XX5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.57■■□□□ 1.2
Pcdhgb5Q91XX5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhgb5Q91XX5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhgb5Q91XX5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Pcdhgb5Q91XX5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhgb5Q91XX5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhgb5Q91XX5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Pcdhgb5Q91XX5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgb5Q91XX5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
Pcdhgb5Q91XX5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgb5Q91XX5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb5Q91XX5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb5Q91XX5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Pcdhgb5Q91XX5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb5Q91XX5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb5Q91XX5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb5Q91XX5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb5Q91XX5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhgb5Q91XX5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
Pcdhgb5Q91XX5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhgb5Q91XX5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhgb5Q91XX5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.52■■□□□ 1.19
Pcdhgb5Q91XX5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.5■■□□□ 1.19
Pcdhgb5Q91XX5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
Pcdhgb5Q91XX5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhgb5Q91XX5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.5■■□□□ 1.19
Pcdhgb5Q91XX5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhgb5Q91XX5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhgb5Q91XX5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhgb5Q91XX5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Pcdhgb5Q91XX5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.48■■□□□ 1.19
Pcdhgb5Q91XX5 Gm5812-201ENSMUST00000061073 957 ntBASIC22.48■■□□□ 1.19
Pcdhgb5Q91XX5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.48■■□□□ 1.19
Pcdhgb5Q91XX5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhgb5Q91XX5 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.47■■□□□ 1.19
Pcdhgb5Q91XX5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhgb5Q91XX5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhgb5Q91XX5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhgb5Q91XX5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhgb5Q91XX5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgb5Q91XX5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Pcdhgb5Q91XX5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgb5Q91XX5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgb5Q91XX5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgb5Q91XX5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms