Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Vopp1Q8R1C3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
Vopp1Q8R1C3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Vopp1Q8R1C3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Vopp1Q8R1C3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.87■■□□□ 1.57
Vopp1Q8R1C3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Vopp1Q8R1C3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Vopp1Q8R1C3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Vopp1Q8R1C3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.85■■□□□ 1.57
Vopp1Q8R1C3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Vopp1Q8R1C3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Vopp1Q8R1C3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.83■■□□□ 1.57
Vopp1Q8R1C3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.83■■□□□ 1.57
Vopp1Q8R1C3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Vopp1Q8R1C3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Vopp1Q8R1C3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Vopp1Q8R1C3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Vopp1Q8R1C3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Vopp1Q8R1C3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Vopp1Q8R1C3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Vopp1Q8R1C3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Vopp1Q8R1C3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Vopp1Q8R1C3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
Vopp1Q8R1C3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.79■■□□□ 1.56
Vopp1Q8R1C3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Vopp1Q8R1C3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
Vopp1Q8R1C3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Vopp1Q8R1C3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Vopp1Q8R1C3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Vopp1Q8R1C3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Vopp1Q8R1C3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Vopp1Q8R1C3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Vopp1Q8R1C3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.78■■□□□ 1.56
Vopp1Q8R1C3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Vopp1Q8R1C3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Vopp1Q8R1C3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Vopp1Q8R1C3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.76■■□□□ 1.55
Vopp1Q8R1C3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Vopp1Q8R1C3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Vopp1Q8R1C3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.76■■□□□ 1.55
Vopp1Q8R1C3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Vopp1Q8R1C3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Vopp1Q8R1C3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Vopp1Q8R1C3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Vopp1Q8R1C3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Vopp1Q8R1C3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Vopp1Q8R1C3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Vopp1Q8R1C3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Vopp1Q8R1C3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Vopp1Q8R1C3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Vopp1Q8R1C3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.74■■□□□ 1.55
Vopp1Q8R1C3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Vopp1Q8R1C3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.73■■□□□ 1.55
Vopp1Q8R1C3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Vopp1Q8R1C3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Vopp1Q8R1C3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Vopp1Q8R1C3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Vopp1Q8R1C3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.71■■□□□ 1.55
Vopp1Q8R1C3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Vopp1Q8R1C3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
Vopp1Q8R1C3 Gm10420-201ENSMUST00000121713 882 ntBASIC24.7■■□□□ 1.54
Vopp1Q8R1C3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Vopp1Q8R1C3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Vopp1Q8R1C3 Gm44428-201ENSMUST00000204474 874 ntBASIC24.69■■□□□ 1.54
Vopp1Q8R1C3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Vopp1Q8R1C3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Vopp1Q8R1C3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Vopp1Q8R1C3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Vopp1Q8R1C3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
Vopp1Q8R1C3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Vopp1Q8R1C3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.67■■□□□ 1.54
Vopp1Q8R1C3 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.67■■□□□ 1.54
Vopp1Q8R1C3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Vopp1Q8R1C3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Vopp1Q8R1C3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Vopp1Q8R1C3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Vopp1Q8R1C3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Vopp1Q8R1C3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.66■■□□□ 1.54
Vopp1Q8R1C3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Vopp1Q8R1C3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Vopp1Q8R1C3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.65■■□□□ 1.54
Vopp1Q8R1C3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
Vopp1Q8R1C3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Vopp1Q8R1C3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Vopp1Q8R1C3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Vopp1Q8R1C3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Vopp1Q8R1C3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Vopp1Q8R1C3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Vopp1Q8R1C3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Vopp1Q8R1C3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.64■■□□□ 1.54
Vopp1Q8R1C3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Vopp1Q8R1C3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Vopp1Q8R1C3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.64■■□□□ 1.54
Vopp1Q8R1C3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Vopp1Q8R1C3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
Vopp1Q8R1C3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Vopp1Q8R1C3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Vopp1Q8R1C3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Vopp1Q8R1C3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Vopp1Q8R1C3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms