Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rft1Q8C3B8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rft1Q8C3B8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rft1Q8C3B8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rft1Q8C3B8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rft1Q8C3B8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rft1Q8C3B8 Gm30023-201ENSMUST00000197970 889 ntBASIC20.04■□□□□ 0.8
Rft1Q8C3B8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rft1Q8C3B8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.03■□□□□ 0.8
Rft1Q8C3B8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.03■□□□□ 0.8
Rft1Q8C3B8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rft1Q8C3B8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rft1Q8C3B8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Rft1Q8C3B8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Rft1Q8C3B8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rft1Q8C3B8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rft1Q8C3B8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Rft1Q8C3B8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rft1Q8C3B8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rft1Q8C3B8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Rft1Q8C3B8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rft1Q8C3B8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rft1Q8C3B8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rft1Q8C3B8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rft1Q8C3B8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rft1Q8C3B8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rft1Q8C3B8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rft1Q8C3B8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rft1Q8C3B8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rft1Q8C3B8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Rft1Q8C3B8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rft1Q8C3B8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rft1Q8C3B8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rft1Q8C3B8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rft1Q8C3B8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rft1Q8C3B8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rft1Q8C3B8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rft1Q8C3B8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Rft1Q8C3B8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rft1Q8C3B8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rft1Q8C3B8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rft1Q8C3B8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rft1Q8C3B8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rft1Q8C3B8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.98■□□□□ 0.79
Rft1Q8C3B8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rft1Q8C3B8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.98■□□□□ 0.79
Rft1Q8C3B8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.98■□□□□ 0.79
Rft1Q8C3B8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rft1Q8C3B8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rft1Q8C3B8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Rft1Q8C3B8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.97■□□□□ 0.79
Rft1Q8C3B8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rft1Q8C3B8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rft1Q8C3B8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.97■□□□□ 0.79
Rft1Q8C3B8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rft1Q8C3B8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rft1Q8C3B8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rft1Q8C3B8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rft1Q8C3B8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.96■□□□□ 0.79
Rft1Q8C3B8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rft1Q8C3B8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rft1Q8C3B8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rft1Q8C3B8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rft1Q8C3B8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rft1Q8C3B8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.95■□□□□ 0.78
Rft1Q8C3B8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rft1Q8C3B8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rft1Q8C3B8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rft1Q8C3B8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rft1Q8C3B8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rft1Q8C3B8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rft1Q8C3B8 Gm7432-201ENSMUST00000210343 879 ntBASIC19.93■□□□□ 0.78
Rft1Q8C3B8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rft1Q8C3B8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rft1Q8C3B8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rft1Q8C3B8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rft1Q8C3B8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rft1Q8C3B8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.92■□□□□ 0.78
Rft1Q8C3B8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rft1Q8C3B8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rft1Q8C3B8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.91■□□□□ 0.78
Rft1Q8C3B8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rft1Q8C3B8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rft1Q8C3B8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rft1Q8C3B8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rft1Q8C3B8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rft1Q8C3B8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rft1Q8C3B8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rft1Q8C3B8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rft1Q8C3B8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rft1Q8C3B8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rft1Q8C3B8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rft1Q8C3B8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.89■□□□□ 0.77
Rft1Q8C3B8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rft1Q8C3B8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rft1Q8C3B8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rft1Q8C3B8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rft1Q8C3B8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rft1Q8C3B8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.88■□□□□ 0.77
Rft1Q8C3B8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms