Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.4■■□□□ 1.82
Scfd1Q8BRF7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Scfd1Q8BRF7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Scfd1Q8BRF7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Scfd1Q8BRF7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.39■■□□□ 1.82
Scfd1Q8BRF7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Scfd1Q8BRF7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Scfd1Q8BRF7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
Scfd1Q8BRF7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Scfd1Q8BRF7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.37■■□□□ 1.81
Scfd1Q8BRF7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.37■■□□□ 1.81
Scfd1Q8BRF7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Scfd1Q8BRF7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Scfd1Q8BRF7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.36■■□□□ 1.81
Scfd1Q8BRF7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Scfd1Q8BRF7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Scfd1Q8BRF7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Scfd1Q8BRF7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.34■■□□□ 1.81
Scfd1Q8BRF7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Scfd1Q8BRF7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Scfd1Q8BRF7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
Scfd1Q8BRF7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Scfd1Q8BRF7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
Scfd1Q8BRF7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
Scfd1Q8BRF7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scfd1Q8BRF7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scfd1Q8BRF7 Gm44428-201ENSMUST00000204474 874 ntBASIC26.32■■□□□ 1.8
Scfd1Q8BRF7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scfd1Q8BRF7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.32■■□□□ 1.8
Scfd1Q8BRF7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scfd1Q8BRF7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scfd1Q8BRF7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Scfd1Q8BRF7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Scfd1Q8BRF7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.3■■□□□ 1.8
Scfd1Q8BRF7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Scfd1Q8BRF7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Scfd1Q8BRF7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Scfd1Q8BRF7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Scfd1Q8BRF7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.28■■□□□ 1.8
Scfd1Q8BRF7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.28■■□□□ 1.8
Scfd1Q8BRF7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
Scfd1Q8BRF7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Scfd1Q8BRF7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Scfd1Q8BRF7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Scfd1Q8BRF7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scfd1Q8BRF7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Scfd1Q8BRF7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scfd1Q8BRF7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scfd1Q8BRF7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Scfd1Q8BRF7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Scfd1Q8BRF7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Scfd1Q8BRF7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Scfd1Q8BRF7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Scfd1Q8BRF7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Scfd1Q8BRF7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Scfd1Q8BRF7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.25■■□□□ 1.79
Scfd1Q8BRF7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Scfd1Q8BRF7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.24■■□□□ 1.79
Scfd1Q8BRF7 Gm10420-201ENSMUST00000121713 882 ntBASIC26.24■■□□□ 1.79
Scfd1Q8BRF7 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.24■■□□□ 1.79
Scfd1Q8BRF7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Scfd1Q8BRF7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.24■■□□□ 1.79
Scfd1Q8BRF7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Scfd1Q8BRF7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Scfd1Q8BRF7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Scfd1Q8BRF7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Scfd1Q8BRF7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Scfd1Q8BRF7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Scfd1Q8BRF7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Scfd1Q8BRF7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Scfd1Q8BRF7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Scfd1Q8BRF7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Scfd1Q8BRF7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Scfd1Q8BRF7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Scfd1Q8BRF7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Scfd1Q8BRF7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Scfd1Q8BRF7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Scfd1Q8BRF7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Scfd1Q8BRF7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.19■■□□□ 1.78
Scfd1Q8BRF7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.19■■□□□ 1.78
Scfd1Q8BRF7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Scfd1Q8BRF7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.18■■□□□ 1.78
Scfd1Q8BRF7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Scfd1Q8BRF7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Scfd1Q8BRF7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Scfd1Q8BRF7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Scfd1Q8BRF7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.16■■□□□ 1.78
Scfd1Q8BRF7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Scfd1Q8BRF7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Scfd1Q8BRF7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Scfd1Q8BRF7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Scfd1Q8BRF7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Scfd1Q8BRF7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Scfd1Q8BRF7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.14■■□□□ 1.78
Scfd1Q8BRF7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
Scfd1Q8BRF7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Scfd1Q8BRF7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.78
Scfd1Q8BRF7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Scfd1Q8BRF7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Scfd1Q8BRF7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms