Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Suds3Q8BR65 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Suds3Q8BR65 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Suds3Q8BR65 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Suds3Q8BR65 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Suds3Q8BR65 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Suds3Q8BR65 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Suds3Q8BR65 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Suds3Q8BR65 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Suds3Q8BR65 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Suds3Q8BR65 Gm6311-201ENSMUST00000073790 878 ntBASIC23.03■■□□□ 1.28
Suds3Q8BR65 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Suds3Q8BR65 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.02■■□□□ 1.28
Suds3Q8BR65 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.02■■□□□ 1.28
Suds3Q8BR65 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Suds3Q8BR65 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.01■■□□□ 1.27
Suds3Q8BR65 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Suds3Q8BR65 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Suds3Q8BR65 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
Suds3Q8BR65 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Suds3Q8BR65 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Suds3Q8BR65 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Suds3Q8BR65 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Suds3Q8BR65 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Suds3Q8BR65 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Suds3Q8BR65 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Suds3Q8BR65 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Suds3Q8BR65 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.98■■□□□ 1.27
Suds3Q8BR65 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Suds3Q8BR65 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Suds3Q8BR65 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Suds3Q8BR65 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.97■■□□□ 1.27
Suds3Q8BR65 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.97■■□□□ 1.27
Suds3Q8BR65 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Suds3Q8BR65 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Suds3Q8BR65 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Suds3Q8BR65 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Suds3Q8BR65 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Suds3Q8BR65 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Suds3Q8BR65 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.96■■□□□ 1.27
Suds3Q8BR65 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Suds3Q8BR65 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Suds3Q8BR65 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Suds3Q8BR65 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Suds3Q8BR65 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Suds3Q8BR65 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Suds3Q8BR65 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Suds3Q8BR65 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Suds3Q8BR65 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Suds3Q8BR65 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Suds3Q8BR65 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Suds3Q8BR65 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Suds3Q8BR65 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Suds3Q8BR65 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Suds3Q8BR65 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Suds3Q8BR65 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Suds3Q8BR65 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Suds3Q8BR65 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Suds3Q8BR65 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Suds3Q8BR65 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Suds3Q8BR65 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Suds3Q8BR65 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Suds3Q8BR65 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Suds3Q8BR65 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Suds3Q8BR65 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Suds3Q8BR65 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Suds3Q8BR65 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
Suds3Q8BR65 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Suds3Q8BR65 Gm4799-201ENSMUST00000095396 657 ntBASIC22.89■■□□□ 1.25
Suds3Q8BR65 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.89■■□□□ 1.25
Suds3Q8BR65 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Suds3Q8BR65 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Suds3Q8BR65 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
Suds3Q8BR65 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Suds3Q8BR65 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Suds3Q8BR65 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Suds3Q8BR65 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Suds3Q8BR65 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.87■■□□□ 1.25
Suds3Q8BR65 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Suds3Q8BR65 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Suds3Q8BR65 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Suds3Q8BR65 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Suds3Q8BR65 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Suds3Q8BR65 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Suds3Q8BR65 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Suds3Q8BR65 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Suds3Q8BR65 Gm11175-201ENSMUST00000116172 543 ntBASIC22.85■■□□□ 1.25
Suds3Q8BR65 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Suds3Q8BR65 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Suds3Q8BR65 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Suds3Q8BR65 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Suds3Q8BR65 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.84■■□□□ 1.25
Suds3Q8BR65 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Suds3Q8BR65 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.84■■□□□ 1.25
Suds3Q8BR65 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Suds3Q8BR65 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Suds3Q8BR65 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Suds3Q8BR65 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.83■■□□□ 1.25
Suds3Q8BR65 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Suds3Q8BR65 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.83■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms