Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Chmp2bQ8BJF9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.16■■□□□ 1.3
Chmp2bQ8BJF9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Chmp2bQ8BJF9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.15■■□□□ 1.3
Chmp2bQ8BJF9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chmp2bQ8BJF9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.14■■□□□ 1.29
Chmp2bQ8BJF9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
Chmp2bQ8BJF9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chmp2bQ8BJF9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
Chmp2bQ8BJF9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chmp2bQ8BJF9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Chmp2bQ8BJF9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Chmp2bQ8BJF9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chmp2bQ8BJF9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chmp2bQ8BJF9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chmp2bQ8BJF9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chmp2bQ8BJF9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chmp2bQ8BJF9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp2bQ8BJF9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp2bQ8BJF9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp2bQ8BJF9 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.11■■□□□ 1.29
Chmp2bQ8BJF9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp2bQ8BJF9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Chmp2bQ8BJF9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp2bQ8BJF9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp2bQ8BJF9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.11■■□□□ 1.29
Chmp2bQ8BJF9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Chmp2bQ8BJF9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Chmp2bQ8BJF9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.1■■□□□ 1.29
Chmp2bQ8BJF9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
Chmp2bQ8BJF9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Chmp2bQ8BJF9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Chmp2bQ8BJF9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Chmp2bQ8BJF9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Chmp2bQ8BJF9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Chmp2bQ8BJF9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Chmp2bQ8BJF9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Chmp2bQ8BJF9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Chmp2bQ8BJF9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Chmp2bQ8BJF9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.06■■□□□ 1.28
Chmp2bQ8BJF9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.06■■□□□ 1.28
Chmp2bQ8BJF9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp2bQ8BJF9 Gm37136-201ENSMUST00000194368 194 ntBASIC23.06■■□□□ 1.28
Chmp2bQ8BJF9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp2bQ8BJF9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp2bQ8BJF9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Chmp2bQ8BJF9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Chmp2bQ8BJF9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.05■■□□□ 1.28
Chmp2bQ8BJF9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Chmp2bQ8BJF9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
Chmp2bQ8BJF9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Chmp2bQ8BJF9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Chmp2bQ8BJF9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Chmp2bQ8BJF9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Chmp2bQ8BJF9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Chmp2bQ8BJF9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Chmp2bQ8BJF9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Chmp2bQ8BJF9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Chmp2bQ8BJF9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Chmp2bQ8BJF9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Chmp2bQ8BJF9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Chmp2bQ8BJF9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
Chmp2bQ8BJF9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.02■■□□□ 1.28
Chmp2bQ8BJF9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Chmp2bQ8BJF9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Chmp2bQ8BJF9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Chmp2bQ8BJF9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chmp2bQ8BJF9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Chmp2bQ8BJF9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chmp2bQ8BJF9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chmp2bQ8BJF9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.01■■□□□ 1.27
Chmp2bQ8BJF9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.01■■□□□ 1.27
Chmp2bQ8BJF9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.01■■□□□ 1.27
Chmp2bQ8BJF9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.01■■□□□ 1.27
Chmp2bQ8BJF9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Chmp2bQ8BJF9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Chmp2bQ8BJF9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23■■□□□ 1.27
Chmp2bQ8BJF9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Chmp2bQ8BJF9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23■■□□□ 1.27
Chmp2bQ8BJF9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23■■□□□ 1.27
Chmp2bQ8BJF9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Chmp2bQ8BJF9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Chmp2bQ8BJF9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Chmp2bQ8BJF9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Chmp2bQ8BJF9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.99■■□□□ 1.27
Chmp2bQ8BJF9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Chmp2bQ8BJF9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.98■■□□□ 1.27
Chmp2bQ8BJF9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Chmp2bQ8BJF9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Chmp2bQ8BJF9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Chmp2bQ8BJF9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Chmp2bQ8BJF9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chmp2bQ8BJF9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Chmp2bQ8BJF9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.96■■□□□ 1.27
Chmp2bQ8BJF9 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.96■■□□□ 1.27
Chmp2bQ8BJF9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.95■■□□□ 1.26
Chmp2bQ8BJF9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Chmp2bQ8BJF9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chmp2bQ8BJF9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Chmp2bQ8BJF9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.93■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms