Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Nod1Q8BHB0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Nod1Q8BHB0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Nod1Q8BHB0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Nod1Q8BHB0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Nod1Q8BHB0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Nod1Q8BHB0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Nod1Q8BHB0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Nod1Q8BHB0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.1■■□□□ 1.45
Nod1Q8BHB0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Nod1Q8BHB0 Gm5921-201ENSMUST00000075898 882 ntBASIC24.1■■□□□ 1.45
Nod1Q8BHB0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.1■■□□□ 1.45
Nod1Q8BHB0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Nod1Q8BHB0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.09■■□□□ 1.45
Nod1Q8BHB0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.08■■□□□ 1.45
Nod1Q8BHB0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Nod1Q8BHB0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Nod1Q8BHB0 Gm44428-201ENSMUST00000204474 874 ntBASIC24.07■■□□□ 1.44
Nod1Q8BHB0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.07■■□□□ 1.44
Nod1Q8BHB0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Nod1Q8BHB0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.06■■□□□ 1.44
Nod1Q8BHB0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.06■■□□□ 1.44
Nod1Q8BHB0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Nod1Q8BHB0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Nod1Q8BHB0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Nod1Q8BHB0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Nod1Q8BHB0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Nod1Q8BHB0 Gm5812-201ENSMUST00000061073 957 ntBASIC24.04■■□□□ 1.44
Nod1Q8BHB0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.03■■□□□ 1.44
Nod1Q8BHB0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.03■■□□□ 1.44
Nod1Q8BHB0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Nod1Q8BHB0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Nod1Q8BHB0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Nod1Q8BHB0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Nod1Q8BHB0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Nod1Q8BHB0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Nod1Q8BHB0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Nod1Q8BHB0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Nod1Q8BHB0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Nod1Q8BHB0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Nod1Q8BHB0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Nod1Q8BHB0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24■■□□□ 1.43
Nod1Q8BHB0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24■■□□□ 1.43
Nod1Q8BHB0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Nod1Q8BHB0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Nod1Q8BHB0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Nod1Q8BHB0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Nod1Q8BHB0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Nod1Q8BHB0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.97■■□□□ 1.43
Nod1Q8BHB0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.97■■□□□ 1.43
Nod1Q8BHB0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Nod1Q8BHB0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.96■■□□□ 1.43
Nod1Q8BHB0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Nod1Q8BHB0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.96■■□□□ 1.43
Nod1Q8BHB0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.96■■□□□ 1.43
Nod1Q8BHB0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Nod1Q8BHB0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Nod1Q8BHB0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Nod1Q8BHB0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.95■■□□□ 1.42
Nod1Q8BHB0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Nod1Q8BHB0 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.94■■□□□ 1.42
Nod1Q8BHB0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Nod1Q8BHB0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Nod1Q8BHB0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.94■■□□□ 1.42
Nod1Q8BHB0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Nod1Q8BHB0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Nod1Q8BHB0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Nod1Q8BHB0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
Nod1Q8BHB0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Nod1Q8BHB0 Gm15546-201ENSMUST00000122095 826 ntBASIC23.91■■□□□ 1.42
Nod1Q8BHB0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Nod1Q8BHB0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Nod1Q8BHB0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Nod1Q8BHB0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Nod1Q8BHB0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Nod1Q8BHB0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Nod1Q8BHB0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Nod1Q8BHB0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Nod1Q8BHB0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Nod1Q8BHB0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Nod1Q8BHB0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.87■■□□□ 1.41
Nod1Q8BHB0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.87■■□□□ 1.41
Nod1Q8BHB0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Nod1Q8BHB0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.86■■□□□ 1.41
Nod1Q8BHB0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nod1Q8BHB0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nod1Q8BHB0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nod1Q8BHB0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nod1Q8BHB0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Nod1Q8BHB0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.84■■□□□ 1.41
Nod1Q8BHB0 Gm22567-201ENSMUST00000175542 342 ntBASIC23.84■■□□□ 1.41
Nod1Q8BHB0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.84■■□□□ 1.41
Nod1Q8BHB0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Nod1Q8BHB0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Nod1Q8BHB0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.84■■□□□ 1.41
Nod1Q8BHB0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Nod1Q8BHB0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nod1Q8BHB0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.82■■□□□ 1.4
Nod1Q8BHB0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nod1Q8BHB0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms