Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.6■□□□□ 0.89
Ubr5Q80TP3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr5Q80TP3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr5Q80TP3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.58■□□□□ 0.89
Ubr5Q80TP3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ubr5Q80TP3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ubr5Q80TP3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ubr5Q80TP3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.58■□□□□ 0.88
Ubr5Q80TP3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ubr5Q80TP3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ubr5Q80TP3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.57■□□□□ 0.88
Ubr5Q80TP3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr5Q80TP3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.57■□□□□ 0.88
Ubr5Q80TP3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr5Q80TP3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr5Q80TP3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr5Q80TP3 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.56■□□□□ 0.88
Ubr5Q80TP3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ubr5Q80TP3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr5Q80TP3 Terc-201ENSMUST00000082862 423 ntBASIC20.55■□□□□ 0.88
Ubr5Q80TP3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.55■□□□□ 0.88
Ubr5Q80TP3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr5Q80TP3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr5Q80TP3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr5Q80TP3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr5Q80TP3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ubr5Q80TP3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr5Q80TP3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr5Q80TP3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.54■□□□□ 0.88
Ubr5Q80TP3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ubr5Q80TP3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr5Q80TP3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr5Q80TP3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr5Q80TP3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr5Q80TP3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr5Q80TP3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr5Q80TP3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ubr5Q80TP3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr5Q80TP3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr5Q80TP3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ubr5Q80TP3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr5Q80TP3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr5Q80TP3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr5Q80TP3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.49■□□□□ 0.87
Ubr5Q80TP3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.49■□□□□ 0.87
Ubr5Q80TP3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.49■□□□□ 0.87
Ubr5Q80TP3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr5Q80TP3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr5Q80TP3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ubr5Q80TP3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ubr5Q80TP3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ubr5Q80TP3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr5Q80TP3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr5Q80TP3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ubr5Q80TP3 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.47■□□□□ 0.87
Ubr5Q80TP3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr5Q80TP3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr5Q80TP3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr5Q80TP3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr5Q80TP3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr5Q80TP3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ubr5Q80TP3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ubr5Q80TP3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ubr5Q80TP3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ubr5Q80TP3 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.44■□□□□ 0.86
Ubr5Q80TP3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubr5Q80TP3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubr5Q80TP3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.43■□□□□ 0.86
Ubr5Q80TP3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.43■□□□□ 0.86
Ubr5Q80TP3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ubr5Q80TP3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ubr5Q80TP3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubr5Q80TP3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubr5Q80TP3 Gm44428-201ENSMUST00000204474 874 ntBASIC20.42■□□□□ 0.86
Ubr5Q80TP3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubr5Q80TP3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Ubr5Q80TP3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubr5Q80TP3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubr5Q80TP3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.41■□□□□ 0.86
Ubr5Q80TP3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubr5Q80TP3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.4■□□□□ 0.86
Ubr5Q80TP3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Ubr5Q80TP3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ubr5Q80TP3 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.4■□□□□ 0.86
Ubr5Q80TP3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.4■□□□□ 0.86
Ubr5Q80TP3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ubr5Q80TP3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ubr5Q80TP3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ubr5Q80TP3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.4■□□□□ 0.86
Ubr5Q80TP3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ubr5Q80TP3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ubr5Q80TP3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Ubr5Q80TP3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ubr5Q80TP3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ubr5Q80TP3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubr5Q80TP3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ubr5Q80TP3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.37■□□□□ 0.85
Ubr5Q80TP3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubr5Q80TP3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.36■□□□□ 0.85
Ubr5Q80TP3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms