Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pif1Q80SX8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pif1Q80SX8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pif1Q80SX8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.03■□□□□ 0.96
Pif1Q80SX8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pif1Q80SX8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Pif1Q80SX8 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.02■□□□□ 0.96
Pif1Q80SX8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pif1Q80SX8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pif1Q80SX8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pif1Q80SX8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Pif1Q80SX8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pif1Q80SX8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pif1Q80SX8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Pif1Q80SX8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pif1Q80SX8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pif1Q80SX8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pif1Q80SX8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pif1Q80SX8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pif1Q80SX8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.98■□□□□ 0.95
Pif1Q80SX8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pif1Q80SX8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.98■□□□□ 0.95
Pif1Q80SX8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pif1Q80SX8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pif1Q80SX8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pif1Q80SX8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pif1Q80SX8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pif1Q80SX8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Pif1Q80SX8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.96■□□□□ 0.95
Pif1Q80SX8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pif1Q80SX8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.96■□□□□ 0.95
Pif1Q80SX8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pif1Q80SX8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.95■□□□□ 0.95
Pif1Q80SX8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Pif1Q80SX8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pif1Q80SX8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pif1Q80SX8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pif1Q80SX8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.94■□□□□ 0.94
Pif1Q80SX8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pif1Q80SX8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pif1Q80SX8 Gm5921-201ENSMUST00000075898 882 ntBASIC20.94■□□□□ 0.94
Pif1Q80SX8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Pif1Q80SX8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pif1Q80SX8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pif1Q80SX8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
Pif1Q80SX8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pif1Q80SX8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pif1Q80SX8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pif1Q80SX8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pif1Q80SX8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pif1Q80SX8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pif1Q80SX8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pif1Q80SX8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pif1Q80SX8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pif1Q80SX8 Gm5812-201ENSMUST00000061073 957 ntBASIC20.9■□□□□ 0.94
Pif1Q80SX8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pif1Q80SX8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pif1Q80SX8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pif1Q80SX8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pif1Q80SX8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.89■□□□□ 0.93
Pif1Q80SX8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pif1Q80SX8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pif1Q80SX8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pif1Q80SX8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.88■□□□□ 0.93
Pif1Q80SX8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pif1Q80SX8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pif1Q80SX8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pif1Q80SX8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pif1Q80SX8 Gm44428-201ENSMUST00000204474 874 ntBASIC20.87■□□□□ 0.93
Pif1Q80SX8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Pif1Q80SX8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.86■□□□□ 0.93
Pif1Q80SX8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.86■□□□□ 0.93
Pif1Q80SX8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pif1Q80SX8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pif1Q80SX8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pif1Q80SX8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pif1Q80SX8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pif1Q80SX8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pif1Q80SX8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pif1Q80SX8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.84■□□□□ 0.93
Pif1Q80SX8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.84■□□□□ 0.93
Pif1Q80SX8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pif1Q80SX8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Pif1Q80SX8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Pif1Q80SX8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.81■□□□□ 0.92
Pif1Q80SX8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.8■□□□□ 0.92
Pif1Q80SX8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pif1Q80SX8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pif1Q80SX8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pif1Q80SX8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pif1Q80SX8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pif1Q80SX8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pif1Q80SX8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pif1Q80SX8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pif1Q80SX8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pif1Q80SX8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pif1Q80SX8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pif1Q80SX8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pif1Q80SX8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pif1Q80SX8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms