Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
ShprhQ7TPQ3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC33.52■■■□□ 2.96
ShprhQ7TPQ3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC33.51■■■□□ 2.96
ShprhQ7TPQ3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
ShprhQ7TPQ3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
ShprhQ7TPQ3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
ShprhQ7TPQ3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
ShprhQ7TPQ3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC33.48■■■□□ 2.95
ShprhQ7TPQ3 Gm22567-201ENSMUST00000175542 342 ntBASIC33.46■■■□□ 2.95
ShprhQ7TPQ3 Gm44428-201ENSMUST00000204474 874 ntBASIC33.46■■■□□ 2.95
ShprhQ7TPQ3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC33.46■■■□□ 2.95
ShprhQ7TPQ3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC33.46■■■□□ 2.95
ShprhQ7TPQ3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC33.46■■■□□ 2.95
ShprhQ7TPQ3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
ShprhQ7TPQ3 Gm4419-202ENSMUST00000226239 1431 ntBASIC33.45■■■□□ 2.95
ShprhQ7TPQ3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC33.45■■■□□ 2.95
ShprhQ7TPQ3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
ShprhQ7TPQ3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC33.45■■■□□ 2.94
ShprhQ7TPQ3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC33.44■■■□□ 2.94
ShprhQ7TPQ3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC33.44■■■□□ 2.94
ShprhQ7TPQ3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
ShprhQ7TPQ3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
ShprhQ7TPQ3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
ShprhQ7TPQ3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
ShprhQ7TPQ3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC33.41■■■□□ 2.94
ShprhQ7TPQ3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC33.41■■■□□ 2.94
ShprhQ7TPQ3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC33.41■■■□□ 2.94
ShprhQ7TPQ3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
ShprhQ7TPQ3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC33.41■■■□□ 2.94
ShprhQ7TPQ3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC33.41■■■□□ 2.94
ShprhQ7TPQ3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
ShprhQ7TPQ3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
ShprhQ7TPQ3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
ShprhQ7TPQ3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
ShprhQ7TPQ3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC33.39■■■□□ 2.94
ShprhQ7TPQ3 Gm15039-201ENSMUST00000118914 875 ntBASIC33.38■■■□□ 2.93
ShprhQ7TPQ3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC33.37■■■□□ 2.93
ShprhQ7TPQ3 Amer2-203ENSMUST00000225247 2662 ntBASIC33.37■■■□□ 2.93
ShprhQ7TPQ3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC33.36■■■□□ 2.93
ShprhQ7TPQ3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC33.36■■■□□ 2.93
ShprhQ7TPQ3 Gm5522-201ENSMUST00000189483 1242 ntBASIC33.36■■■□□ 2.93
ShprhQ7TPQ3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
ShprhQ7TPQ3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC33.35■■■□□ 2.93
ShprhQ7TPQ3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC33.35■■■□□ 2.93
ShprhQ7TPQ3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
ShprhQ7TPQ3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
ShprhQ7TPQ3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC33.34■■■□□ 2.93
ShprhQ7TPQ3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
ShprhQ7TPQ3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
ShprhQ7TPQ3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
ShprhQ7TPQ3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
ShprhQ7TPQ3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC33.31■■■□□ 2.92
ShprhQ7TPQ3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC33.31■■■□□ 2.92
ShprhQ7TPQ3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC33.31■■■□□ 2.92
ShprhQ7TPQ3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC33.31■■■□□ 2.92
ShprhQ7TPQ3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
ShprhQ7TPQ3 Gm43566-201ENSMUST00000196851 808 ntBASIC33.29■■■□□ 2.92
ShprhQ7TPQ3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
ShprhQ7TPQ3 Gm13238-201ENSMUST00000117655 780 ntBASIC33.27■■■□□ 2.92
ShprhQ7TPQ3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
ShprhQ7TPQ3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
ShprhQ7TPQ3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC33.26■■■□□ 2.92
ShprhQ7TPQ3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC33.26■■■□□ 2.92
ShprhQ7TPQ3 Gm43592-201ENSMUST00000196922 1165 ntBASIC33.26■■■□□ 2.92
ShprhQ7TPQ3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC33.26■■■□□ 2.91
ShprhQ7TPQ3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
ShprhQ7TPQ3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
ShprhQ7TPQ3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC33.25■■■□□ 2.91
ShprhQ7TPQ3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC33.24■■■□□ 2.91
ShprhQ7TPQ3 Gm15546-201ENSMUST00000122095 826 ntBASIC33.23■■■□□ 2.91
ShprhQ7TPQ3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC33.23■■■□□ 2.91
ShprhQ7TPQ3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
ShprhQ7TPQ3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
ShprhQ7TPQ3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC33.21■■■□□ 2.91
ShprhQ7TPQ3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
ShprhQ7TPQ3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
ShprhQ7TPQ3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC33.18■■■□□ 2.9
ShprhQ7TPQ3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC33.18■■■□□ 2.9
ShprhQ7TPQ3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC33.18■■■□□ 2.9
ShprhQ7TPQ3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
ShprhQ7TPQ3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
ShprhQ7TPQ3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
ShprhQ7TPQ3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
ShprhQ7TPQ3 Gm45444-201ENSMUST00000211394 898 ntBASIC33.17■■■□□ 2.9
ShprhQ7TPQ3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC33.16■■■□□ 2.9
ShprhQ7TPQ3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC33.14■■■□□ 2.9
ShprhQ7TPQ3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
ShprhQ7TPQ3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
ShprhQ7TPQ3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC33.13■■■□□ 2.89
ShprhQ7TPQ3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC33.13■■■□□ 2.89
ShprhQ7TPQ3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC33.12■■■□□ 2.89
ShprhQ7TPQ3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
ShprhQ7TPQ3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
ShprhQ7TPQ3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC33.1■■■□□ 2.89
ShprhQ7TPQ3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
ShprhQ7TPQ3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
ShprhQ7TPQ3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC33.09■■■□□ 2.89
ShprhQ7TPQ3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
ShprhQ7TPQ3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
ShprhQ7TPQ3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms