Protein–RNA interactions for Protein: Q6WKZ8

Ubr2, E3 ubiquitin-protein ligase UBR2, mousemouse

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2Q6WKZ8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Ubr2Q6WKZ8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Ubr2Q6WKZ8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Ubr2Q6WKZ8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC29.41■■■□□ 2.3
Ubr2Q6WKZ8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Ubr2Q6WKZ8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Ubr2Q6WKZ8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC29.4■■■□□ 2.3
Ubr2Q6WKZ8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Ubr2Q6WKZ8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Ubr2Q6WKZ8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Ubr2Q6WKZ8 Gm5067-201ENSMUST00000170449 1009 ntBASIC29.39■■■□□ 2.29
Ubr2Q6WKZ8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ubr2Q6WKZ8 Gm5921-201ENSMUST00000075898 882 ntBASIC29.35■■■□□ 2.29
Ubr2Q6WKZ8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ubr2Q6WKZ8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC29.34■■■□□ 2.29
Ubr2Q6WKZ8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ubr2Q6WKZ8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Ubr2Q6WKZ8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC29.33■■■□□ 2.29
Ubr2Q6WKZ8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Ubr2Q6WKZ8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ubr2Q6WKZ8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Ubr2Q6WKZ8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Ubr2Q6WKZ8 Gm44428-201ENSMUST00000204474 874 ntBASIC29.32■■■□□ 2.28
Ubr2Q6WKZ8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Ubr2Q6WKZ8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Ubr2Q6WKZ8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ubr2Q6WKZ8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ubr2Q6WKZ8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ubr2Q6WKZ8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ubr2Q6WKZ8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ubr2Q6WKZ8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ubr2Q6WKZ8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC29.28■■■□□ 2.28
Ubr2Q6WKZ8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ubr2Q6WKZ8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
Ubr2Q6WKZ8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC29.26■■■□□ 2.28
Ubr2Q6WKZ8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
Ubr2Q6WKZ8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC29.26■■■□□ 2.27
Ubr2Q6WKZ8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC29.25■■■□□ 2.27
Ubr2Q6WKZ8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Ubr2Q6WKZ8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Ubr2Q6WKZ8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC29.25■■■□□ 2.27
Ubr2Q6WKZ8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Ubr2Q6WKZ8 Gm5812-201ENSMUST00000061073 957 ntBASIC29.24■■■□□ 2.27
Ubr2Q6WKZ8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ubr2Q6WKZ8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC29.22■■■□□ 2.27
Ubr2Q6WKZ8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ubr2Q6WKZ8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ubr2Q6WKZ8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
Ubr2Q6WKZ8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ubr2Q6WKZ8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Ubr2Q6WKZ8 Fezf2-202ENSMUST00000224023 1917 ntBASIC29.2■■■□□ 2.27
Ubr2Q6WKZ8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Ubr2Q6WKZ8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ubr2Q6WKZ8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ubr2Q6WKZ8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Ubr2Q6WKZ8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ubr2Q6WKZ8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
Ubr2Q6WKZ8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ubr2Q6WKZ8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ubr2Q6WKZ8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ubr2Q6WKZ8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ubr2Q6WKZ8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ubr2Q6WKZ8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Ubr2Q6WKZ8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ubr2Q6WKZ8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
Ubr2Q6WKZ8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC29.15■■■□□ 2.26
Ubr2Q6WKZ8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ubr2Q6WKZ8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ubr2Q6WKZ8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Ubr2Q6WKZ8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Ubr2Q6WKZ8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.25
Ubr2Q6WKZ8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC29.13■■■□□ 2.25
Ubr2Q6WKZ8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ubr2Q6WKZ8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
Ubr2Q6WKZ8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC29.12■■■□□ 2.25
Ubr2Q6WKZ8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ubr2Q6WKZ8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ubr2Q6WKZ8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
Ubr2Q6WKZ8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Ubr2Q6WKZ8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Ubr2Q6WKZ8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC29.1■■■□□ 2.25
Ubr2Q6WKZ8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Ubr2Q6WKZ8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
Ubr2Q6WKZ8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ubr2Q6WKZ8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Ubr2Q6WKZ8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Ubr2Q6WKZ8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
Ubr2Q6WKZ8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Ubr2Q6WKZ8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Ubr2Q6WKZ8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC29.08■■■□□ 2.25
Ubr2Q6WKZ8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
Ubr2Q6WKZ8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Ubr2Q6WKZ8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Ubr2Q6WKZ8 Gm43592-201ENSMUST00000196922 1165 ntBASIC29.06■■■□□ 2.24
Ubr2Q6WKZ8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC29.05■■■□□ 2.24
Ubr2Q6WKZ8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Ubr2Q6WKZ8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Ubr2Q6WKZ8 Gm43566-201ENSMUST00000196851 808 ntBASIC29.03■■■□□ 2.24
Ubr2Q6WKZ8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Ubr2Q6WKZ8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC29.01■■■□□ 2.23
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms