Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.33■■□□□ 1.01
Ripk1Q60855 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.33■■□□□ 1.01
Ripk1Q60855 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ripk1Q60855 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ripk1Q60855 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ripk1Q60855 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ripk1Q60855 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ripk1Q60855 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Ripk1Q60855 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ripk1Q60855 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Ripk1Q60855 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ripk1Q60855 Gm11599-201ENSMUST00000118720 878 ntBASIC21.3■■□□□ 1
Ripk1Q60855 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ripk1Q60855 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Ripk1Q60855 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ripk1Q60855 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ripk1Q60855 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ripk1Q60855 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ripk1Q60855 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ripk1Q60855 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ripk1Q60855 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ripk1Q60855 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ripk1Q60855 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.29■■□□□ 1
Ripk1Q60855 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ripk1Q60855 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ripk1Q60855 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ripk1Q60855 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ripk1Q60855 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ripk1Q60855 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ripk1Q60855 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ripk1Q60855 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ripk1Q60855 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ripk1Q60855 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ripk1Q60855 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ripk1Q60855 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ripk1Q60855 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ripk1Q60855 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ripk1Q60855 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.25■□□□□ 0.99
Ripk1Q60855 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk1Q60855 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk1Q60855 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.25■□□□□ 0.99
Ripk1Q60855 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk1Q60855 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk1Q60855 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ripk1Q60855 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ripk1Q60855 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ripk1Q60855 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ripk1Q60855 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.23■□□□□ 0.99
Ripk1Q60855 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.23■□□□□ 0.99
Ripk1Q60855 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ripk1Q60855 Gm4799-201ENSMUST00000095396 657 ntBASIC21.23■□□□□ 0.99
Ripk1Q60855 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ripk1Q60855 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ripk1Q60855 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ripk1Q60855 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ripk1Q60855 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ripk1Q60855 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ripk1Q60855 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
Ripk1Q60855 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.22■□□□□ 0.99
Ripk1Q60855 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ripk1Q60855 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.22■□□□□ 0.99
Ripk1Q60855 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ripk1Q60855 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ripk1Q60855 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ripk1Q60855 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.21■□□□□ 0.99
Ripk1Q60855 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ripk1Q60855 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ripk1Q60855 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ripk1Q60855 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ripk1Q60855 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Ripk1Q60855 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ripk1Q60855 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ripk1Q60855 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ripk1Q60855 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ripk1Q60855 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.19■□□□□ 0.98
Ripk1Q60855 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.19■□□□□ 0.98
Ripk1Q60855 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ripk1Q60855 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ripk1Q60855 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ripk1Q60855 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ripk1Q60855 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.18■□□□□ 0.98
Ripk1Q60855 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ripk1Q60855 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Ripk1Q60855 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ripk1Q60855 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ripk1Q60855 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.17■□□□□ 0.98
Ripk1Q60855 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ripk1Q60855 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ripk1Q60855 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Ripk1Q60855 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ripk1Q60855 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ripk1Q60855 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ripk1Q60855 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ripk1Q60855 Mir3960-201ENSMUST00000198213 73 ntBASIC21.13■□□□□ 0.97
Ripk1Q60855 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.13■□□□□ 0.97
Ripk1Q60855 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ripk1Q60855 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ripk1Q60855 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ripk1Q60855 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ripk1Q60855 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms