Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Defb28Q3V2L0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.48■■□□□ 1.19
Defb28Q3V2L0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.48■■□□□ 1.19
Defb28Q3V2L0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Defb28Q3V2L0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Defb28Q3V2L0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Defb28Q3V2L0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Defb28Q3V2L0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Defb28Q3V2L0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Defb28Q3V2L0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Defb28Q3V2L0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Defb28Q3V2L0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Defb28Q3V2L0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
Defb28Q3V2L0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Defb28Q3V2L0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.44■■□□□ 1.18
Defb28Q3V2L0 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.44■■□□□ 1.18
Defb28Q3V2L0 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.44■■□□□ 1.18
Defb28Q3V2L0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Defb28Q3V2L0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Defb28Q3V2L0 Gm45444-201ENSMUST00000211394 898 ntBASIC22.43■■□□□ 1.18
Defb28Q3V2L0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Defb28Q3V2L0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Defb28Q3V2L0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Defb28Q3V2L0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Defb28Q3V2L0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Defb28Q3V2L0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Defb28Q3V2L0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Defb28Q3V2L0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Defb28Q3V2L0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.4■■□□□ 1.18
Defb28Q3V2L0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Defb28Q3V2L0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Defb28Q3V2L0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Defb28Q3V2L0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Defb28Q3V2L0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.39■■□□□ 1.18
Defb28Q3V2L0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Defb28Q3V2L0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.39■■□□□ 1.17
Defb28Q3V2L0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Defb28Q3V2L0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Defb28Q3V2L0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Defb28Q3V2L0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Defb28Q3V2L0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.37■■□□□ 1.17
Defb28Q3V2L0 Gm9959-201ENSMUST00000068277 390 ntBASIC22.37■■□□□ 1.17
Defb28Q3V2L0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Defb28Q3V2L0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Defb28Q3V2L0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Defb28Q3V2L0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Defb28Q3V2L0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Defb28Q3V2L0 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.36■■□□□ 1.17
Defb28Q3V2L0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Defb28Q3V2L0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Defb28Q3V2L0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Defb28Q3V2L0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Defb28Q3V2L0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Defb28Q3V2L0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.34■■□□□ 1.17
Defb28Q3V2L0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.34■■□□□ 1.17
Defb28Q3V2L0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Defb28Q3V2L0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Defb28Q3V2L0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Defb28Q3V2L0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Defb28Q3V2L0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Defb28Q3V2L0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.32■■□□□ 1.16
Defb28Q3V2L0 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.32■■□□□ 1.16
Defb28Q3V2L0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Defb28Q3V2L0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Defb28Q3V2L0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
Defb28Q3V2L0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Defb28Q3V2L0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.3■■□□□ 1.16
Defb28Q3V2L0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Defb28Q3V2L0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Defb28Q3V2L0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.29■■□□□ 1.16
Defb28Q3V2L0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Defb28Q3V2L0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Defb28Q3V2L0 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.28■■□□□ 1.16
Defb28Q3V2L0 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.28■■□□□ 1.16
Defb28Q3V2L0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Defb28Q3V2L0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Defb28Q3V2L0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Defb28Q3V2L0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.28■■□□□ 1.16
Defb28Q3V2L0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Defb28Q3V2L0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Defb28Q3V2L0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Defb28Q3V2L0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Defb28Q3V2L0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Defb28Q3V2L0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Defb28Q3V2L0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.26■■□□□ 1.15
Defb28Q3V2L0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Defb28Q3V2L0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
Defb28Q3V2L0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Defb28Q3V2L0 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.24■■□□□ 1.15
Defb28Q3V2L0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Defb28Q3V2L0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Defb28Q3V2L0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Defb28Q3V2L0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Defb28Q3V2L0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Defb28Q3V2L0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.22■■□□□ 1.15
Defb28Q3V2L0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.22■■□□□ 1.15
Defb28Q3V2L0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.22■■□□□ 1.15
Defb28Q3V2L0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Defb28Q3V2L0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.21■■□□□ 1.15
Defb28Q3V2L0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms