Protein–RNA interactions for Protein: Q2WF71

Lrfn1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, mousemouse

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn1Q2WF71 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.79■□□□□ 0.92
Lrfn1Q2WF71 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrfn1Q2WF71 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Lrfn1Q2WF71 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrfn1Q2WF71 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrfn1Q2WF71 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrfn1Q2WF71 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lrfn1Q2WF71 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrfn1Q2WF71 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrfn1Q2WF71 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lrfn1Q2WF71 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lrfn1Q2WF71 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lrfn1Q2WF71 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lrfn1Q2WF71 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lrfn1Q2WF71 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lrfn1Q2WF71 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lrfn1Q2WF71 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lrfn1Q2WF71 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lrfn1Q2WF71 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Lrfn1Q2WF71 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Lrfn1Q2WF71 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lrfn1Q2WF71 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.75■□□□□ 0.91
Lrfn1Q2WF71 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lrfn1Q2WF71 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lrfn1Q2WF71 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lrfn1Q2WF71 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrfn1Q2WF71 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lrfn1Q2WF71 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrfn1Q2WF71 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lrfn1Q2WF71 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrfn1Q2WF71 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lrfn1Q2WF71 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lrfn1Q2WF71 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lrfn1Q2WF71 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.71■□□□□ 0.91
Lrfn1Q2WF71 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lrfn1Q2WF71 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Lrfn1Q2WF71 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
Lrfn1Q2WF71 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lrfn1Q2WF71 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lrfn1Q2WF71 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lrfn1Q2WF71 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.7■□□□□ 0.9
Lrfn1Q2WF71 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Lrfn1Q2WF71 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrfn1Q2WF71 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrfn1Q2WF71 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Lrfn1Q2WF71 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrfn1Q2WF71 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrfn1Q2WF71 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Lrfn1Q2WF71 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lrfn1Q2WF71 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Lrfn1Q2WF71 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lrfn1Q2WF71 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lrfn1Q2WF71 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Lrfn1Q2WF71 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lrfn1Q2WF71 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrfn1Q2WF71 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrfn1Q2WF71 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrfn1Q2WF71 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lrfn1Q2WF71 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.65■□□□□ 0.9
Lrfn1Q2WF71 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrfn1Q2WF71 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrfn1Q2WF71 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Lrfn1Q2WF71 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrfn1Q2WF71 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
Lrfn1Q2WF71 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
Lrfn1Q2WF71 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lrfn1Q2WF71 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lrfn1Q2WF71 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.64■□□□□ 0.89
Lrfn1Q2WF71 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.63■□□□□ 0.89
Lrfn1Q2WF71 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lrfn1Q2WF71 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Lrfn1Q2WF71 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.63■□□□□ 0.89
Lrfn1Q2WF71 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lrfn1Q2WF71 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.62■□□□□ 0.89
Lrfn1Q2WF71 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lrfn1Q2WF71 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lrfn1Q2WF71 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrfn1Q2WF71 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrfn1Q2WF71 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrfn1Q2WF71 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrfn1Q2WF71 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Lrfn1Q2WF71 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lrfn1Q2WF71 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrfn1Q2WF71 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.59■□□□□ 0.89
Lrfn1Q2WF71 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Lrfn1Q2WF71 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Lrfn1Q2WF71 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lrfn1Q2WF71 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lrfn1Q2WF71 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrfn1Q2WF71 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Lrfn1Q2WF71 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrfn1Q2WF71 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrfn1Q2WF71 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrfn1Q2WF71 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrfn1Q2WF71 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lrfn1Q2WF71 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lrfn1Q2WF71 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrfn1Q2WF71 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrfn1Q2WF71 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrfn1Q2WF71 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms