Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SgcdP82347 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SgcdP82347 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
SgcdP82347 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SgcdP82347 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
SgcdP82347 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SgcdP82347 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.84■□□□□ 0.93
SgcdP82347 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SgcdP82347 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SgcdP82347 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SgcdP82347 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SgcdP82347 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SgcdP82347 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SgcdP82347 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SgcdP82347 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SgcdP82347 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SgcdP82347 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.81■□□□□ 0.92
SgcdP82347 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SgcdP82347 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
SgcdP82347 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SgcdP82347 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SgcdP82347 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SgcdP82347 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SgcdP82347 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SgcdP82347 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SgcdP82347 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SgcdP82347 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SgcdP82347 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SgcdP82347 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.79■□□□□ 0.92
SgcdP82347 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SgcdP82347 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SgcdP82347 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.78■□□□□ 0.92
SgcdP82347 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SgcdP82347 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SgcdP82347 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SgcdP82347 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SgcdP82347 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.78■□□□□ 0.92
SgcdP82347 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SgcdP82347 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SgcdP82347 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
SgcdP82347 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SgcdP82347 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.77■□□□□ 0.92
SgcdP82347 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SgcdP82347 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SgcdP82347 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.76■□□□□ 0.91
SgcdP82347 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SgcdP82347 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SgcdP82347 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SgcdP82347 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SgcdP82347 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.75■□□□□ 0.91
SgcdP82347 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SgcdP82347 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SgcdP82347 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SgcdP82347 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SgcdP82347 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SgcdP82347 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SgcdP82347 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SgcdP82347 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
SgcdP82347 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SgcdP82347 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SgcdP82347 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SgcdP82347 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SgcdP82347 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SgcdP82347 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SgcdP82347 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SgcdP82347 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SgcdP82347 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SgcdP82347 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SgcdP82347 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SgcdP82347 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SgcdP82347 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SgcdP82347 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SgcdP82347 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SgcdP82347 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SgcdP82347 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SgcdP82347 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SgcdP82347 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
SgcdP82347 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SgcdP82347 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SgcdP82347 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SgcdP82347 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SgcdP82347 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SgcdP82347 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SgcdP82347 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SgcdP82347 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SgcdP82347 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SgcdP82347 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SgcdP82347 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SgcdP82347 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SgcdP82347 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.66■□□□□ 0.9
SgcdP82347 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SgcdP82347 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SgcdP82347 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SgcdP82347 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SgcdP82347 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.9
SgcdP82347 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SgcdP82347 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SgcdP82347 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SgcdP82347 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SgcdP82347 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 124.4 ms