Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Tnfrsf1aP25118 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.92■□□□□ 0.62
Tnfrsf1aP25118 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf1aP25118 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf1aP25118 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Tnfrsf1aP25118 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf1aP25118 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf1aP25118 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf1aP25118 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.91■□□□□ 0.62
Tnfrsf1aP25118 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf1aP25118 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf1aP25118 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Tnfrsf1aP25118 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf1aP25118 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf1aP25118 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf1aP25118 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf1aP25118 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Tnfrsf1aP25118 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf1aP25118 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf1aP25118 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf1aP25118 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.89■□□□□ 0.61
Tnfrsf1aP25118 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf1aP25118 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1aP25118 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1aP25118 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1aP25118 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1aP25118 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1aP25118 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1aP25118 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1aP25118 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf1aP25118 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.87■□□□□ 0.61
Tnfrsf1aP25118 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Tnfrsf1aP25118 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.87■□□□□ 0.61
Tnfrsf1aP25118 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf1aP25118 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf1aP25118 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf1aP25118 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf1aP25118 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1aP25118 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1aP25118 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.85■□□□□ 0.61
Tnfrsf1aP25118 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Tnfrsf1aP25118 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1aP25118 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1aP25118 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1aP25118 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf1aP25118 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
Tnfrsf1aP25118 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.84■□□□□ 0.61
Tnfrsf1aP25118 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
Tnfrsf1aP25118 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Tnfrsf1aP25118 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf1aP25118 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.83■□□□□ 0.61
Tnfrsf1aP25118 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf1aP25118 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1aP25118 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1aP25118 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1aP25118 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1aP25118 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1aP25118 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1aP25118 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tnfrsf1aP25118 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf1aP25118 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf1aP25118 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf1aP25118 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Tnfrsf1aP25118 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.8■□□□□ 0.6
Tnfrsf1aP25118 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf1aP25118 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf1aP25118 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf1aP25118 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf1aP25118 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.79■□□□□ 0.6
Tnfrsf1aP25118 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf1aP25118 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tnfrsf1aP25118 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf1aP25118 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tnfrsf1aP25118 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1aP25118 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1aP25118 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1aP25118 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1aP25118 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1aP25118 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1aP25118 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf1aP25118 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Tnfrsf1aP25118 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf1aP25118 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf1aP25118 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf1aP25118 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf1aP25118 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf1aP25118 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf1aP25118 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms