Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf17O88472 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf17O88472 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf17O88472 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf17O88472 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf17O88472 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf17O88472 Gm44428-201ENSMUST00000204474 874 ntBASIC21.6■■□□□ 1.05
Tnfrsf17O88472 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf17O88472 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf17O88472 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf17O88472 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf17O88472 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf17O88472 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Tnfrsf17O88472 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnfrsf17O88472 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.58■■□□□ 1.05
Tnfrsf17O88472 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnfrsf17O88472 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Tnfrsf17O88472 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnfrsf17O88472 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnfrsf17O88472 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Tnfrsf17O88472 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Tnfrsf17O88472 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Tnfrsf17O88472 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf17O88472 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf17O88472 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.56■■□□□ 1.04
Tnfrsf17O88472 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tnfrsf17O88472 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tnfrsf17O88472 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.55■■□□□ 1.04
Tnfrsf17O88472 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf17O88472 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf17O88472 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.54■■□□□ 1.04
Tnfrsf17O88472 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfrsf17O88472 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfrsf17O88472 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfrsf17O88472 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.54■■□□□ 1.04
Tnfrsf17O88472 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfrsf17O88472 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.53■■□□□ 1.04
Tnfrsf17O88472 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.53■■□□□ 1.04
Tnfrsf17O88472 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfrsf17O88472 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfrsf17O88472 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Tnfrsf17O88472 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.52■■□□□ 1.03
Tnfrsf17O88472 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Tnfrsf17O88472 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfrsf17O88472 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfrsf17O88472 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.51■■□□□ 1.03
Tnfrsf17O88472 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tnfrsf17O88472 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tnfrsf17O88472 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tnfrsf17O88472 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tnfrsf17O88472 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.49■■□□□ 1.03
Tnfrsf17O88472 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Tnfrsf17O88472 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfrsf17O88472 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
Tnfrsf17O88472 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf17O88472 Etf1-202ENSMUST00000180351 108 ntBASIC21.47■■□□□ 1.03
Tnfrsf17O88472 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf17O88472 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.47■■□□□ 1.03
Tnfrsf17O88472 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf17O88472 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf17O88472 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf17O88472 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf17O88472 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.46■■□□□ 1.03
Tnfrsf17O88472 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf17O88472 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
Tnfrsf17O88472 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfrsf17O88472 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.45■■□□□ 1.02
Tnfrsf17O88472 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.44■■□□□ 1.02
Tnfrsf17O88472 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.44■■□□□ 1.02
Tnfrsf17O88472 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf17O88472 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf17O88472 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf17O88472 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tnfrsf17O88472 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.43■■□□□ 1.02
Tnfrsf17O88472 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tnfrsf17O88472 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tnfrsf17O88472 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tnfrsf17O88472 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Tnfrsf17O88472 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tnfrsf17O88472 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Tnfrsf17O88472 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.42■■□□□ 1.02
Tnfrsf17O88472 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Tnfrsf17O88472 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf17O88472 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.41■■□□□ 1.02
Tnfrsf17O88472 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.39■■□□□ 1.02
Tnfrsf17O88472 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tnfrsf17O88472 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Tnfrsf17O88472 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnfrsf17O88472 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Tnfrsf17O88472 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf17O88472 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.38■■□□□ 1.01
Tnfrsf17O88472 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf17O88472 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf17O88472 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Tnfrsf17O88472 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf17O88472 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf17O88472 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Tnfrsf17O88472 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf17O88472 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf17O88472 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms