Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.63■■□□□ 1.69
Trdmt1O55055 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC25.63■■□□□ 1.69
Trdmt1O55055 Gm5812-201ENSMUST00000061073 957 ntBASIC25.63■■□□□ 1.69
Trdmt1O55055 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Trdmt1O55055 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Trdmt1O55055 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Trdmt1O55055 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Trdmt1O55055 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Trdmt1O55055 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Trdmt1O55055 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trdmt1O55055 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Trdmt1O55055 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trdmt1O55055 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.59■■□□□ 1.69
Trdmt1O55055 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trdmt1O55055 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.59■■□□□ 1.69
Trdmt1O55055 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.58■■□□□ 1.69
Trdmt1O55055 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trdmt1O55055 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC25.58■■□□□ 1.69
Trdmt1O55055 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Trdmt1O55055 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Trdmt1O55055 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trdmt1O55055 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.57■■□□□ 1.68
Trdmt1O55055 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trdmt1O55055 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Trdmt1O55055 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trdmt1O55055 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Trdmt1O55055 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC25.55■■□□□ 1.68
Trdmt1O55055 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trdmt1O55055 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Trdmt1O55055 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Trdmt1O55055 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Trdmt1O55055 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Trdmt1O55055 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.53■■□□□ 1.68
Trdmt1O55055 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trdmt1O55055 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Trdmt1O55055 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Trdmt1O55055 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
Trdmt1O55055 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trdmt1O55055 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trdmt1O55055 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trdmt1O55055 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.5■■□□□ 1.67
Trdmt1O55055 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Trdmt1O55055 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Trdmt1O55055 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Trdmt1O55055 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trdmt1O55055 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.49■■□□□ 1.67
Trdmt1O55055 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Trdmt1O55055 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25.47■■□□□ 1.67
Trdmt1O55055 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Trdmt1O55055 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Trdmt1O55055 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Trdmt1O55055 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Trdmt1O55055 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Trdmt1O55055 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Trdmt1O55055 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trdmt1O55055 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trdmt1O55055 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Trdmt1O55055 Gm15546-201ENSMUST00000122095 826 ntBASIC25.42■■□□□ 1.66
Trdmt1O55055 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.42■■□□□ 1.66
Trdmt1O55055 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Trdmt1O55055 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Trdmt1O55055 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Trdmt1O55055 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trdmt1O55055 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trdmt1O55055 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.41■■□□□ 1.66
Trdmt1O55055 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Trdmt1O55055 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC25.4■■□□□ 1.66
Trdmt1O55055 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.4■■□□□ 1.66
Trdmt1O55055 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.39■■□□□ 1.66
Trdmt1O55055 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Trdmt1O55055 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trdmt1O55055 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.38■■□□□ 1.65
Trdmt1O55055 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
Trdmt1O55055 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Trdmt1O55055 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Trdmt1O55055 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Trdmt1O55055 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC25.37■■□□□ 1.65
Trdmt1O55055 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC25.37■■□□□ 1.65
Trdmt1O55055 Gm22567-201ENSMUST00000175542 342 ntBASIC25.36■■□□□ 1.65
Trdmt1O55055 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.35■■□□□ 1.65
Trdmt1O55055 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Trdmt1O55055 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.34■■□□□ 1.65
Trdmt1O55055 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Trdmt1O55055 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
Trdmt1O55055 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trdmt1O55055 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
Trdmt1O55055 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trdmt1O55055 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trdmt1O55055 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
Trdmt1O55055 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC25.32■■□□□ 1.64
Trdmt1O55055 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trdmt1O55055 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Trdmt1O55055 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trdmt1O55055 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trdmt1O55055 Gm13238-201ENSMUST00000117655 780 ntBASIC25.31■■□□□ 1.64
Trdmt1O55055 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trdmt1O55055 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trdmt1O55055 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Trdmt1O55055 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Trdmt1O55055 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.29■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms