Protein–RNA interactions for Protein: O08792

Ebf2, Transcription factor COE2, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf2O08792 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ebf2O08792 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ebf2O08792 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ebf2O08792 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ebf2O08792 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.28■■□□□ 1.32
Ebf2O08792 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ebf2O08792 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ebf2O08792 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ebf2O08792 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Ebf2O08792 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ebf2O08792 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ebf2O08792 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ebf2O08792 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ebf2O08792 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.26■■□□□ 1.31
Ebf2O08792 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ebf2O08792 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.25■■□□□ 1.31
Ebf2O08792 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.25■■□□□ 1.31
Ebf2O08792 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ebf2O08792 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Ebf2O08792 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Ebf2O08792 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ebf2O08792 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ebf2O08792 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ebf2O08792 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ebf2O08792 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Ebf2O08792 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ebf2O08792 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ebf2O08792 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.22■■□□□ 1.31
Ebf2O08792 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ebf2O08792 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ebf2O08792 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ebf2O08792 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.2■■□□□ 1.3
Ebf2O08792 Scarna2-201ENSMUST00000157560 414 ntBASIC23.2■■□□□ 1.3
Ebf2O08792 Gm37136-201ENSMUST00000194368 194 ntBASIC23.2■■□□□ 1.3
Ebf2O08792 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ebf2O08792 Gm4799-201ENSMUST00000095396 657 ntBASIC23.19■■□□□ 1.3
Ebf2O08792 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Ebf2O08792 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.18■■□□□ 1.3
Ebf2O08792 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ebf2O08792 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.18■■□□□ 1.3
Ebf2O08792 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ebf2O08792 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.17■■□□□ 1.3
Ebf2O08792 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ebf2O08792 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.16■■□□□ 1.3
Ebf2O08792 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Ebf2O08792 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ebf2O08792 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ebf2O08792 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ebf2O08792 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ebf2O08792 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ebf2O08792 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ebf2O08792 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Ebf2O08792 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ebf2O08792 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ebf2O08792 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ebf2O08792 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Ebf2O08792 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ebf2O08792 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ebf2O08792 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ebf2O08792 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.14■■□□□ 1.29
Ebf2O08792 Mir3960-201ENSMUST00000198213 73 ntBASIC23.14■■□□□ 1.29
Ebf2O08792 Gm45364-201ENSMUST00000210883 159 ntBASIC23.14■■□□□ 1.29
Ebf2O08792 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ebf2O08792 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ebf2O08792 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Ebf2O08792 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.13■■□□□ 1.29
Ebf2O08792 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.13■■□□□ 1.29
Ebf2O08792 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ebf2O08792 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ebf2O08792 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
Ebf2O08792 Gm9806-201ENSMUST00000051080 552 ntBASIC23.12■■□□□ 1.29
Ebf2O08792 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.12■■□□□ 1.29
Ebf2O08792 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Ebf2O08792 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ebf2O08792 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ebf2O08792 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.11■■□□□ 1.29
Ebf2O08792 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Ebf2O08792 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ebf2O08792 Gm16437-201ENSMUST00000025669 507 ntBASIC23.1■■□□□ 1.29
Ebf2O08792 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ebf2O08792 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.1■■□□□ 1.29
Ebf2O08792 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Ebf2O08792 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ebf2O08792 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ebf2O08792 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ebf2O08792 Gm11687-201ENSMUST00000118911 886 ntBASIC23.08■■□□□ 1.29
Ebf2O08792 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.08■■□□□ 1.29
Ebf2O08792 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ebf2O08792 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Ebf2O08792 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
Ebf2O08792 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ebf2O08792 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.07■■□□□ 1.28
Ebf2O08792 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ebf2O08792 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Ebf2O08792 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
Ebf2O08792 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ebf2O08792 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ebf2O08792 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ebf2O08792 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ebf2O08792 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms