Protein–RNA interactions for Protein: F2Z478

Gm11238, Predicted gene 11238, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11238F2Z478 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Gm11238F2Z478 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Gm11238F2Z478 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Gm11238F2Z478 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.23■■□□□ 1.47
Gm11238F2Z478 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Gm11238F2Z478 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Gm11238F2Z478 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Gm11238F2Z478 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Gm11238F2Z478 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.22■■□□□ 1.47
Gm11238F2Z478 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Gm11238F2Z478 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Gm11238F2Z478 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.19■■□□□ 1.46
Gm11238F2Z478 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Gm11238F2Z478 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.18■■□□□ 1.46
Gm11238F2Z478 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Gm11238F2Z478 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Gm11238F2Z478 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.17■■□□□ 1.46
Gm11238F2Z478 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Gm11238F2Z478 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Gm11238F2Z478 Gm5921-201ENSMUST00000075898 882 ntBASIC24.17■■□□□ 1.46
Gm11238F2Z478 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Gm11238F2Z478 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Gm11238F2Z478 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Gm11238F2Z478 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Gm11238F2Z478 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Gm11238F2Z478 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Gm11238F2Z478 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.15■■□□□ 1.46
Gm11238F2Z478 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.14■■□□□ 1.45
Gm11238F2Z478 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Gm11238F2Z478 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.12■■□□□ 1.45
Gm11238F2Z478 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Gm11238F2Z478 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Gm11238F2Z478 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.12■■□□□ 1.45
Gm11238F2Z478 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.12■■□□□ 1.45
Gm11238F2Z478 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Gm11238F2Z478 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Gm11238F2Z478 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Gm11238F2Z478 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Gm11238F2Z478 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.1■■□□□ 1.45
Gm11238F2Z478 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Gm11238F2Z478 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
Gm11238F2Z478 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Gm11238F2Z478 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Gm11238F2Z478 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Gm11238F2Z478 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Gm11238F2Z478 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Gm11238F2Z478 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Gm11238F2Z478 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Gm11238F2Z478 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.05■■□□□ 1.44
Gm11238F2Z478 Gm5812-201ENSMUST00000061073 957 ntBASIC24.05■■□□□ 1.44
Gm11238F2Z478 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Gm11238F2Z478 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Gm11238F2Z478 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Gm11238F2Z478 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.04■■□□□ 1.44
Gm11238F2Z478 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Gm11238F2Z478 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Gm11238F2Z478 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Gm11238F2Z478 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Gm11238F2Z478 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Gm11238F2Z478 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Gm11238F2Z478 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Gm11238F2Z478 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Gm11238F2Z478 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Gm11238F2Z478 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Gm11238F2Z478 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Gm11238F2Z478 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Gm11238F2Z478 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Gm11238F2Z478 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.02■■□□□ 1.44
Gm11238F2Z478 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Gm11238F2Z478 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24■■□□□ 1.43
Gm11238F2Z478 AC117769.4-201ENSMUST00000225679 685 ntBASIC24■■□□□ 1.43
Gm11238F2Z478 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Gm11238F2Z478 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24■■□□□ 1.43
Gm11238F2Z478 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Gm11238F2Z478 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Gm11238F2Z478 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Gm11238F2Z478 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.98■■□□□ 1.43
Gm11238F2Z478 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Gm11238F2Z478 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Gm11238F2Z478 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.98■■□□□ 1.43
Gm11238F2Z478 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Gm11238F2Z478 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
Gm11238F2Z478 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Gm11238F2Z478 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Gm11238F2Z478 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Gm11238F2Z478 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Gm11238F2Z478 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Gm11238F2Z478 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.96■■□□□ 1.43
Gm11238F2Z478 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Gm11238F2Z478 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Gm11238F2Z478 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.95■■□□□ 1.42
Gm11238F2Z478 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Gm11238F2Z478 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm11238F2Z478 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm11238F2Z478 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Gm11238F2Z478 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Gm11238F2Z478 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Gm11238F2Z478 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Gm11238F2Z478 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Gm11238F2Z478 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms