Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC32.7■■■□□ 2.83
Zc3h13E9Q784 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC32.69■■■□□ 2.82
Zc3h13E9Q784 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Zc3h13E9Q784 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC32.68■■■□□ 2.82
Zc3h13E9Q784 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Zc3h13E9Q784 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Zc3h13E9Q784 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
Zc3h13E9Q784 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
Zc3h13E9Q784 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
Zc3h13E9Q784 Gm13238-201ENSMUST00000117655 780 ntBASIC32.67■■■□□ 2.82
Zc3h13E9Q784 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Zc3h13E9Q784 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Zc3h13E9Q784 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Zc3h13E9Q784 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Zc3h13E9Q784 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Zc3h13E9Q784 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC32.65■■■□□ 2.82
Zc3h13E9Q784 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Zc3h13E9Q784 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Zc3h13E9Q784 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Zc3h13E9Q784 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Zc3h13E9Q784 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Zc3h13E9Q784 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Zc3h13E9Q784 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Zc3h13E9Q784 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Zc3h13E9Q784 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Zc3h13E9Q784 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC32.62■■■□□ 2.81
Zc3h13E9Q784 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Zc3h13E9Q784 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC32.61■■■□□ 2.81
Zc3h13E9Q784 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC32.61■■■□□ 2.81
Zc3h13E9Q784 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Zc3h13E9Q784 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Zc3h13E9Q784 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC32.6■■■□□ 2.81
Zc3h13E9Q784 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
Zc3h13E9Q784 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC32.59■■■□□ 2.81
Zc3h13E9Q784 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Zc3h13E9Q784 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC32.58■■■□□ 2.81
Zc3h13E9Q784 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC32.58■■■□□ 2.81
Zc3h13E9Q784 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC32.58■■■□□ 2.81
Zc3h13E9Q784 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
Zc3h13E9Q784 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
Zc3h13E9Q784 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC32.55■■■□□ 2.8
Zc3h13E9Q784 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC32.54■■■□□ 2.8
Zc3h13E9Q784 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC32.54■■■□□ 2.8
Zc3h13E9Q784 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC32.54■■■□□ 2.8
Zc3h13E9Q784 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Zc3h13E9Q784 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
Zc3h13E9Q784 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Zc3h13E9Q784 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Zc3h13E9Q784 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC32.52■■■□□ 2.8
Zc3h13E9Q784 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC32.52■■■□□ 2.8
Zc3h13E9Q784 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
Zc3h13E9Q784 Gm45444-201ENSMUST00000211394 898 ntBASIC32.52■■■□□ 2.8
Zc3h13E9Q784 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC32.51■■■□□ 2.8
Zc3h13E9Q784 Gm44428-201ENSMUST00000204474 874 ntBASIC32.51■■■□□ 2.8
Zc3h13E9Q784 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC32.51■■■□□ 2.8
Zc3h13E9Q784 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Zc3h13E9Q784 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.79
Zc3h13E9Q784 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Zc3h13E9Q784 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Zc3h13E9Q784 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC32.5■■■□□ 2.79
Zc3h13E9Q784 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC32.5■■■□□ 2.79
Zc3h13E9Q784 Gm43445-201ENSMUST00000198564 2091 ntBASIC32.49■■■□□ 2.79
Zc3h13E9Q784 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Zc3h13E9Q784 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Zc3h13E9Q784 Serp2-204ENSMUST00000228055 705 ntBASIC32.48■■■□□ 2.79
Zc3h13E9Q784 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Zc3h13E9Q784 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Zc3h13E9Q784 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Zc3h13E9Q784 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Zc3h13E9Q784 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Zc3h13E9Q784 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Zc3h13E9Q784 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Zc3h13E9Q784 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC32.44■■■□□ 2.78
Zc3h13E9Q784 Gm9959-201ENSMUST00000068277 390 ntBASIC32.44■■■□□ 2.78
Zc3h13E9Q784 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC32.42■■■□□ 2.78
Zc3h13E9Q784 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Zc3h13E9Q784 Gm37847-201ENSMUST00000192163 1497 ntBASIC32.41■■■□□ 2.78
Zc3h13E9Q784 Gm31748-201ENSMUST00000194938 1497 ntBASIC32.41■■■□□ 2.78
Zc3h13E9Q784 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Zc3h13E9Q784 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Zc3h13E9Q784 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Zc3h13E9Q784 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
Zc3h13E9Q784 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Zc3h13E9Q784 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Zc3h13E9Q784 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Zc3h13E9Q784 Gm5297-201ENSMUST00000198555 1171 ntBASIC32.39■■■□□ 2.78
Zc3h13E9Q784 AC153504.1-201ENSMUST00000218379 2290 ntBASIC32.39■■■□□ 2.77
Zc3h13E9Q784 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
Zc3h13E9Q784 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC32.38■■■□□ 2.77
Zc3h13E9Q784 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Zc3h13E9Q784 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Zc3h13E9Q784 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC32.38■■■□□ 2.77
Zc3h13E9Q784 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Zc3h13E9Q784 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC32.37■■■□□ 2.77
Zc3h13E9Q784 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Zc3h13E9Q784 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Zc3h13E9Q784 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Zc3h13E9Q784 Gm43592-201ENSMUST00000196922 1165 ntBASIC32.35■■■□□ 2.77
Zc3h13E9Q784 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Zc3h13E9Q784 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms