Protein–RNA interactions for Protein: D6RFQ2

Gm42957, Predicted gene 42957, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42957D6RFQ2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Gm42957D6RFQ2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Gm42957D6RFQ2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.63■■□□□ 1.21
Gm42957D6RFQ2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Gm42957D6RFQ2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.62■■□□□ 1.21
Gm42957D6RFQ2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Gm42957D6RFQ2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.61■■□□□ 1.21
Gm42957D6RFQ2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Gm42957D6RFQ2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Gm42957D6RFQ2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.59■■□□□ 1.21
Gm42957D6RFQ2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Gm42957D6RFQ2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Gm42957D6RFQ2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Gm42957D6RFQ2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Gm42957D6RFQ2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Gm42957D6RFQ2 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.58■■□□□ 1.21
Gm42957D6RFQ2 Gm5297-201ENSMUST00000198555 1171 ntBASIC22.58■■□□□ 1.21
Gm42957D6RFQ2 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.58■■□□□ 1.21
Gm42957D6RFQ2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.2
Gm42957D6RFQ2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Gm42957D6RFQ2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Gm42957D6RFQ2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm42957D6RFQ2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm42957D6RFQ2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Gm42957D6RFQ2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm42957D6RFQ2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm42957D6RFQ2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Gm42957D6RFQ2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm42957D6RFQ2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.56■■□□□ 1.2
Gm42957D6RFQ2 Gm44428-201ENSMUST00000204474 874 ntBASIC22.56■■□□□ 1.2
Gm42957D6RFQ2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.56■■□□□ 1.2
Gm42957D6RFQ2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Gm42957D6RFQ2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Gm42957D6RFQ2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Gm42957D6RFQ2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
Gm42957D6RFQ2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm42957D6RFQ2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm42957D6RFQ2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm42957D6RFQ2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm42957D6RFQ2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Gm42957D6RFQ2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Gm42957D6RFQ2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Gm42957D6RFQ2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Gm42957D6RFQ2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Gm42957D6RFQ2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Gm42957D6RFQ2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gm42957D6RFQ2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Gm42957D6RFQ2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Gm42957D6RFQ2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.51■■□□□ 1.19
Gm42957D6RFQ2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.51■■□□□ 1.19
Gm42957D6RFQ2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.51■■□□□ 1.19
Gm42957D6RFQ2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Gm42957D6RFQ2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.5■■□□□ 1.19
Gm42957D6RFQ2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.5■■□□□ 1.19
Gm42957D6RFQ2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm42957D6RFQ2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Gm42957D6RFQ2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm42957D6RFQ2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm42957D6RFQ2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Gm42957D6RFQ2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm42957D6RFQ2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.48■■□□□ 1.19
Gm42957D6RFQ2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.48■■□□□ 1.19
Gm42957D6RFQ2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm42957D6RFQ2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Gm42957D6RFQ2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm42957D6RFQ2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.47■■□□□ 1.19
Gm42957D6RFQ2 Etf1-202ENSMUST00000180351 108 ntBASIC22.47■■□□□ 1.19
Gm42957D6RFQ2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gm42957D6RFQ2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Gm42957D6RFQ2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm42957D6RFQ2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Gm42957D6RFQ2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm42957D6RFQ2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Gm42957D6RFQ2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Gm42957D6RFQ2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Gm42957D6RFQ2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm42957D6RFQ2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Gm42957D6RFQ2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm42957D6RFQ2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Gm42957D6RFQ2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm42957D6RFQ2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.41■■□□□ 1.18
Gm42957D6RFQ2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Gm42957D6RFQ2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm42957D6RFQ2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.4■■□□□ 1.18
Gm42957D6RFQ2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm42957D6RFQ2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Gm42957D6RFQ2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Gm42957D6RFQ2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Gm42957D6RFQ2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Gm42957D6RFQ2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.39■■□□□ 1.17
Gm42957D6RFQ2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Gm42957D6RFQ2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Gm42957D6RFQ2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
Gm42957D6RFQ2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm42957D6RFQ2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.38■■□□□ 1.17
Gm42957D6RFQ2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm42957D6RFQ2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Gm42957D6RFQ2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm42957D6RFQ2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.37■■□□□ 1.17
Gm42957D6RFQ2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms