Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.07■■□□□ 1.28
Gm3854A0A1B0GSS6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.06■■□□□ 1.28
Gm3854A0A1B0GSS6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.06■■□□□ 1.28
Gm3854A0A1B0GSS6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
Gm3854A0A1B0GSS6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Gm3854A0A1B0GSS6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Gm3854A0A1B0GSS6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Gm3854A0A1B0GSS6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Gm3854A0A1B0GSS6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Gm3854A0A1B0GSS6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Gm3854A0A1B0GSS6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
Gm3854A0A1B0GSS6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Gm3854A0A1B0GSS6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Gm3854A0A1B0GSS6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Gm3854A0A1B0GSS6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Gm3854A0A1B0GSS6 Gm44428-201ENSMUST00000204474 874 ntBASIC23.03■■□□□ 1.28
Gm3854A0A1B0GSS6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.03■■□□□ 1.28
Gm3854A0A1B0GSS6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.03■■□□□ 1.28
Gm3854A0A1B0GSS6 Gm5812-201ENSMUST00000061073 957 ntBASIC23.02■■□□□ 1.28
Gm3854A0A1B0GSS6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Gm3854A0A1B0GSS6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Gm3854A0A1B0GSS6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Gm3854A0A1B0GSS6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23■■□□□ 1.27
Gm3854A0A1B0GSS6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23■■□□□ 1.27
Gm3854A0A1B0GSS6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23■■□□□ 1.27
Gm3854A0A1B0GSS6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Gm3854A0A1B0GSS6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Gm3854A0A1B0GSS6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.98■■□□□ 1.27
Gm3854A0A1B0GSS6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Gm3854A0A1B0GSS6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Gm3854A0A1B0GSS6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Gm3854A0A1B0GSS6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.98■■□□□ 1.27
Gm3854A0A1B0GSS6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Gm3854A0A1B0GSS6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Gm3854A0A1B0GSS6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Gm3854A0A1B0GSS6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Gm3854A0A1B0GSS6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Gm3854A0A1B0GSS6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.94■■□□□ 1.26
Gm3854A0A1B0GSS6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.94■■□□□ 1.26
Gm3854A0A1B0GSS6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gm3854A0A1B0GSS6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Gm3854A0A1B0GSS6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gm3854A0A1B0GSS6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.94■■□□□ 1.26
Gm3854A0A1B0GSS6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Gm3854A0A1B0GSS6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Gm3854A0A1B0GSS6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.93■■□□□ 1.26
Gm3854A0A1B0GSS6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Gm3854A0A1B0GSS6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Gm3854A0A1B0GSS6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Gm3854A0A1B0GSS6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Gm3854A0A1B0GSS6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.92■■□□□ 1.26
Gm3854A0A1B0GSS6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Gm3854A0A1B0GSS6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Gm3854A0A1B0GSS6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Gm3854A0A1B0GSS6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Gm3854A0A1B0GSS6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Gm3854A0A1B0GSS6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Gm3854A0A1B0GSS6 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.91■■□□□ 1.26
Gm3854A0A1B0GSS6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
Gm3854A0A1B0GSS6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Gm3854A0A1B0GSS6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Gm3854A0A1B0GSS6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Gm3854A0A1B0GSS6 Gm15546-201ENSMUST00000122095 826 ntBASIC22.87■■□□□ 1.25
Gm3854A0A1B0GSS6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Gm3854A0A1B0GSS6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Gm3854A0A1B0GSS6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Gm3854A0A1B0GSS6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Gm3854A0A1B0GSS6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Gm3854A0A1B0GSS6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.84■■□□□ 1.25
Gm3854A0A1B0GSS6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Gm3854A0A1B0GSS6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Gm3854A0A1B0GSS6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Gm3854A0A1B0GSS6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.84■■□□□ 1.25
Gm3854A0A1B0GSS6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.84■■□□□ 1.25
Gm3854A0A1B0GSS6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.83■■□□□ 1.25
Gm3854A0A1B0GSS6 Gm22567-201ENSMUST00000175542 342 ntBASIC22.83■■□□□ 1.25
Gm3854A0A1B0GSS6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.83■■□□□ 1.25
Gm3854A0A1B0GSS6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Gm3854A0A1B0GSS6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Gm3854A0A1B0GSS6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Gm3854A0A1B0GSS6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Gm3854A0A1B0GSS6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.82■■□□□ 1.24
Gm3854A0A1B0GSS6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.82■■□□□ 1.24
Gm3854A0A1B0GSS6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Gm3854A0A1B0GSS6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Gm3854A0A1B0GSS6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.81■■□□□ 1.24
Gm3854A0A1B0GSS6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
Gm3854A0A1B0GSS6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Gm3854A0A1B0GSS6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Gm3854A0A1B0GSS6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Gm3854A0A1B0GSS6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Gm3854A0A1B0GSS6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Gm3854A0A1B0GSS6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Gm3854A0A1B0GSS6 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.78■■□□□ 1.24
Gm3854A0A1B0GSS6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Gm3854A0A1B0GSS6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Gm3854A0A1B0GSS6 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.77■■□□□ 1.24
Gm3854A0A1B0GSS6 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.77■■□□□ 1.24
Gm3854A0A1B0GSS6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Gm3854A0A1B0GSS6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms