Protein–RNA interactions for Protein: A0A0A6YXN4

Ighv1-18, Immunoglobulin heavy variable V1-18 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-18A0A0A6YXN4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-18A0A0A6YXN4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-18A0A0A6YXN4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-18A0A0A6YXN4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-18A0A0A6YXN4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-18A0A0A6YXN4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-18A0A0A6YXN4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ighv1-18A0A0A6YXN4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.4■□□□□ 0.54
Ighv1-18A0A0A6YXN4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ighv1-18A0A0A6YXN4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Ighv1-18A0A0A6YXN4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.37■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.37■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.36■□□□□ 0.53
Ighv1-18A0A0A6YXN4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.36■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-18A0A0A6YXN4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.35■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Gm7432-201ENSMUST00000210343 879 ntBASIC18.35■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.35■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.34■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv1-18A0A0A6YXN4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-18A0A0A6YXN4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
Ighv1-18A0A0A6YXN4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.31■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.3■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.3■□□□□ 0.52
Ighv1-18A0A0A6YXN4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ighv1-18A0A0A6YXN4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-18A0A0A6YXN4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.28■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.27■□□□□ 0.52
Ighv1-18A0A0A6YXN4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-18A0A0A6YXN4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.26■□□□□ 0.51
Ighv1-18A0A0A6YXN4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ighv1-18A0A0A6YXN4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.26■□□□□ 0.51
Ighv1-18A0A0A6YXN4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.26■□□□□ 0.51
Ighv1-18A0A0A6YXN4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-18A0A0A6YXN4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-18A0A0A6YXN4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-18A0A0A6YXN4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-18A0A0A6YXN4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-18A0A0A6YXN4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-18A0A0A6YXN4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-18A0A0A6YXN4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-18A0A0A6YXN4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ighv1-18A0A0A6YXN4 Gm11599-201ENSMUST00000118720 878 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms