Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.14■□□□□ 0.65
Ighv3-4A0A0A6YXF1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv3-4A0A0A6YXF1 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.13■□□□□ 0.65
Ighv3-4A0A0A6YXF1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv3-4A0A0A6YXF1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.13■□□□□ 0.65
Ighv3-4A0A0A6YXF1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv3-4A0A0A6YXF1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv3-4A0A0A6YXF1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv3-4A0A0A6YXF1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.12■□□□□ 0.65
Ighv3-4A0A0A6YXF1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ighv3-4A0A0A6YXF1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ighv3-4A0A0A6YXF1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv3-4A0A0A6YXF1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.1■□□□□ 0.65
Ighv3-4A0A0A6YXF1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv3-4A0A0A6YXF1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv3-4A0A0A6YXF1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv3-4A0A0A6YXF1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv3-4A0A0A6YXF1 Gm15546-201ENSMUST00000122095 826 ntBASIC19.09■□□□□ 0.65
Ighv3-4A0A0A6YXF1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv3-4A0A0A6YXF1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.08■□□□□ 0.65
Ighv3-4A0A0A6YXF1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Gm22567-201ENSMUST00000175542 342 ntBASIC19.07■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.07■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv3-4A0A0A6YXF1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.05■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv3-4A0A0A6YXF1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.02■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv3-4A0A0A6YXF1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Gm4419-202ENSMUST00000226239 1431 ntBASIC19■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Gm5522-201ENSMUST00000189483 1242 ntBASIC19■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.97■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.97■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv3-4A0A0A6YXF1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.95■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.95■□□□□ 0.62
Ighv3-4A0A0A6YXF1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.95■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv3-4A0A0A6YXF1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Amer2-203ENSMUST00000225247 2662 ntBASIC18.94■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.93■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.93■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.93■□□□□ 0.62
Ighv3-4A0A0A6YXF1 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.93■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv3-4A0A0A6YXF1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.93■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.92■□□□□ 0.62
Ighv3-4A0A0A6YXF1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.92■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Gm15039-201ENSMUST00000118914 875 ntBASIC18.91■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms