Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-11A0A0A6YWI9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-11A0A0A6YWI9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC15.99■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.98■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC15.97■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC15.96■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-11A0A0A6YWI9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ighv1-11A0A0A6YWI9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-11A0A0A6YWI9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-11A0A0A6YWI9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC15.94■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.93■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC15.93■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC15.93■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-11A0A0A6YWI9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Gm42809-201ENSMUST00000198429 1138 ntBASIC15.92■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.91■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC15.91■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-11A0A0A6YWI9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC15.9■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Gm9939-201ENSMUST00000067161 1154 ntBASIC15.9■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-11A0A0A6YWI9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Ighv1-11A0A0A6YWI9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC15.88■□□□□ 0.13
Ighv1-11A0A0A6YWI9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC15.88■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-11A0A0A6YWI9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Gm6821-201ENSMUST00000107540 542 ntBASIC15.87■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.86■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.86■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC15.86■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ighv1-11A0A0A6YWI9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms