Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18,57■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18,57■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18,57■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18,57■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18,56■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18,56■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18,56■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18,56■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18,56■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18,56■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18,56■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18,56■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18,56■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18,55■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18,55■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18,55■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18,55■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18,55■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18,55■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18,55■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18,54■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18,54■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18,54■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18,54■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18,54■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18,54■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18,54■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18,53■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18,53■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18,53■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18,53■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18,53■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18,52■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18,52■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Tdp2-203ENSMUST00000223804 1136 ntBASIC18,52■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18,52■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18,52■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18,52■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18,52■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18,51■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18,51■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18,51■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18,51■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18,51■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18,51■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18,51■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18,51■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18,51■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18,5■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18,5■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18,5■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18,5■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18,5■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18,5■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18,5■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18,49■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18,49■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18,49■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18,49■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18,49■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18,49■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18,49■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18,49■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18,49■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18,49■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18,49■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18,48■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Gm45855-201ENSMUST00000212546 880 ntBASIC18,48■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18,48■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18,48■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18,48■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18,48■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18,47■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18,47■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18,47■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18,47■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18,47■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18,47■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18,46■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18,46■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18,46■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18,46■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18,46■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18,46■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18,46■□□□□ 0,55
Trav15-2-dv6-2A0A075B650 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18,45■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18,45■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Gm4419-202ENSMUST00000226239 1431 ntBASIC18,45■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18,45■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18,44■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18,44■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18,44■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18,43■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18,43■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18,43■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18,43■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18,43■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18,42■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18,42■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18,42■□□□□ 0,54
Retrieved 100 of 76,532 protein–RNA pairs in 11,3 ms