Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16,53■□□□□ 0,24
Trav13d-1A0A075B606 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16,53■□□□□ 0,24
Trav13d-1A0A075B606 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16,53■□□□□ 0,24
Trav13d-1A0A075B606 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16,53■□□□□ 0,24
Trav13d-1A0A075B606 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16,52■□□□□ 0,24
Trav13d-1A0A075B606 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16,52■□□□□ 0,24
Trav13d-1A0A075B606 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16,52■□□□□ 0,24
Trav13d-1A0A075B606 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16,52■□□□□ 0,24
Trav13d-1A0A075B606 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16,52■□□□□ 0,23
Trav13d-1A0A075B606 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16,51■□□□□ 0,23
Trav13d-1A0A075B606 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16,51■□□□□ 0,23
Trav13d-1A0A075B606 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16,51■□□□□ 0,23
Trav13d-1A0A075B606 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16,51■□□□□ 0,23
Trav13d-1A0A075B606 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16,51■□□□□ 0,23
Trav13d-1A0A075B606 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16,51■□□□□ 0,23
Trav13d-1A0A075B606 Gm12818-201ENSMUST00000117562 1349 ntBASIC16,5■□□□□ 0,23
Trav13d-1A0A075B606 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16,5■□□□□ 0,23
Trav13d-1A0A075B606 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16,5■□□□□ 0,23
Trav13d-1A0A075B606 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16,5■□□□□ 0,23
Trav13d-1A0A075B606 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16,5■□□□□ 0,23
Trav13d-1A0A075B606 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16,5■□□□□ 0,23
Trav13d-1A0A075B606 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16,5■□□□□ 0,23
Trav13d-1A0A075B606 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16,5■□□□□ 0,23
Trav13d-1A0A075B606 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16,5■□□□□ 0,23
Trav13d-1A0A075B606 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16,5■□□□□ 0,23
Trav13d-1A0A075B606 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16,49■□□□□ 0,23
Trav13d-1A0A075B606 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16,49■□□□□ 0,23
Trav13d-1A0A075B606 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16,48■□□□□ 0,23
Trav13d-1A0A075B606 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16,48■□□□□ 0,23
Trav13d-1A0A075B606 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16,48■□□□□ 0,23
Trav13d-1A0A075B606 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16,48■□□□□ 0,23
Trav13d-1A0A075B606 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16,47■□□□□ 0,23
Trav13d-1A0A075B606 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16,47■□□□□ 0,23
Trav13d-1A0A075B606 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16,47■□□□□ 0,23
Trav13d-1A0A075B606 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16,47■□□□□ 0,23
Trav13d-1A0A075B606 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16,47■□□□□ 0,23
Trav13d-1A0A075B606 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16,47■□□□□ 0,23
Trav13d-1A0A075B606 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16,47■□□□□ 0,23
Trav13d-1A0A075B606 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16,47■□□□□ 0,23
Trav13d-1A0A075B606 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16,47■□□□□ 0,23
Trav13d-1A0A075B606 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16,46■□□□□ 0,23
Trav13d-1A0A075B606 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16,46■□□□□ 0,22
Trav13d-1A0A075B606 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16,46■□□□□ 0,22
Trav13d-1A0A075B606 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16,45■□□□□ 0,22
Trav13d-1A0A075B606 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16,45■□□□□ 0,22
Trav13d-1A0A075B606 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16,45■□□□□ 0,22
Trav13d-1A0A075B606 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16,45■□□□□ 0,22
Trav13d-1A0A075B606 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16,45■□□□□ 0,22
Trav13d-1A0A075B606 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16,44■□□□□ 0,22
Trav13d-1A0A075B606 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16,44■□□□□ 0,22
Trav13d-1A0A075B606 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16,44■□□□□ 0,22
Trav13d-1A0A075B606 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16,43■□□□□ 0,22
Trav13d-1A0A075B606 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16,43■□□□□ 0,22
Trav13d-1A0A075B606 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16,43■□□□□ 0,22
Trav13d-1A0A075B606 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16,43■□□□□ 0,22
Trav13d-1A0A075B606 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16,43■□□□□ 0,22
Trav13d-1A0A075B606 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16,43■□□□□ 0,22
Trav13d-1A0A075B606 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16,42■□□□□ 0,22
Trav13d-1A0A075B606 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16,42■□□□□ 0,22
Trav13d-1A0A075B606 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16,42■□□□□ 0,22
Trav13d-1A0A075B606 Gm9812-201ENSMUST00000061934 968 ntBASIC16,42■□□□□ 0,22
Trav13d-1A0A075B606 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16,42■□□□□ 0,22
Trav13d-1A0A075B606 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16,42■□□□□ 0,22
Trav13d-1A0A075B606 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC16,42■□□□□ 0,22
Trav13d-1A0A075B606 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16,42■□□□□ 0,22
Trav13d-1A0A075B606 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16,41■□□□□ 0,22
Trav13d-1A0A075B606 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16,41■□□□□ 0,22
Trav13d-1A0A075B606 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16,41■□□□□ 0,22
Trav13d-1A0A075B606 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16,41■□□□□ 0,22
Trav13d-1A0A075B606 Gm14121-201ENSMUST00000121441 1380 ntBASIC16,4■□□□□ 0,22
Trav13d-1A0A075B606 Gm9910-201ENSMUST00000195385 1550 ntBASIC16,4■□□□□ 0,22
Trav13d-1A0A075B606 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16,4■□□□□ 0,22
Trav13d-1A0A075B606 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16,4■□□□□ 0,22
Trav13d-1A0A075B606 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16,4■□□□□ 0,22
Trav13d-1A0A075B606 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16,39■□□□□ 0,21
Trav13d-1A0A075B606 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16,39■□□□□ 0,21
Trav13d-1A0A075B606 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16,39■□□□□ 0,21
Trav13d-1A0A075B606 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16,39■□□□□ 0,21
Trav13d-1A0A075B606 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16,39■□□□□ 0,21
Trav13d-1A0A075B606 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16,39■□□□□ 0,21
Trav13d-1A0A075B606 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16,38■□□□□ 0,21
Trav13d-1A0A075B606 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16,38■□□□□ 0,21
Trav13d-1A0A075B606 Gm12366-201ENSMUST00000121722 873 ntBASIC16,38■□□□□ 0,21
Trav13d-1A0A075B606 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16,38■□□□□ 0,21
Trav13d-1A0A075B606 Gm27502-201ENSMUST00000183495 199 ntBASIC16,38■□□□□ 0,21
Trav13d-1A0A075B606 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16,38■□□□□ 0,21
Trav13d-1A0A075B606 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16,38■□□□□ 0,21
Trav13d-1A0A075B606 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16,38■□□□□ 0,21
Trav13d-1A0A075B606 Gm5786-201ENSMUST00000085368 882 ntBASIC16,38■□□□□ 0,21
Trav13d-1A0A075B606 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16,38■□□□□ 0,21
Trav13d-1A0A075B606 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16,38■□□□□ 0,21
Trav13d-1A0A075B606 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16,38■□□□□ 0,21
Trav13d-1A0A075B606 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16,37■□□□□ 0,21
Trav13d-1A0A075B606 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16,37■□□□□ 0,21
Trav13d-1A0A075B606 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16,37■□□□□ 0,21
Trav13d-1A0A075B606 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16,37■□□□□ 0,21
Trav13d-1A0A075B606 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16,37■□□□□ 0,21
Trav13d-1A0A075B606 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16,37■□□□□ 0,21
Trav13d-1A0A075B606 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16,37■□□□□ 0,21
Trav13d-1A0A075B606 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16,37■□□□□ 0,21
Retrieved 100 of 76,532 protein–RNA pairs in 14,1 ms