Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AC138028.4-201ENST00000564984 1845 ntBASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 KRT18P68-201ENST00000392293 1000 ntBASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 YBX1P1-201ENST00000445822 960 ntBASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AC017007.3-201ENST00000479865 435 ntBASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 PBX2P1-201ENST00000493219 1291 ntBASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AP001330.3-201ENST00000520123 633 ntBASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 RN7SL371P-201ENST00000578099 267 ntBASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AC105020.6-201ENST00000621523 1217 ntBASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 MYC-208ENST00000641036 567 ntBASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 LINC02228-203ENST00000641970 1355 ntBASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 TFP1-202ENST00000475455 1573 ntBASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 RN7SL832P-201ENST00000607781 1756 ntBASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AC135776.1-201ENST00000319817 2481 ntBASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 AL161772.1-201ENST00000610494 4412 ntBASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms