Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC068587.9-201ENST00000641814 219 ntBASIC16.26■□□□□ 0.19
AP3S1Q92572 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S1Q92572 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S1Q92572 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.26■□□□□ 0.19
AP3S1Q92572 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
AP3S1Q92572 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S1Q92572 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.26■□□□□ 0.19
AP3S1Q92572 AC068338.2-201ENST00000563278 1430 ntBASIC16.26■□□□□ 0.19
AP3S1Q92572 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
AP3S1Q92572 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.26■□□□□ 0.19
AP3S1Q92572 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
AP3S1Q92572 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
AP3S1Q92572 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S1Q92572 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.26■□□□□ 0.19
AP3S1Q92572 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S1Q92572 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
AP3S1Q92572 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
AP3S1Q92572 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.25■□□□□ 0.19
AP3S1Q92572 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.25■□□□□ 0.19
AP3S1Q92572 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.25■□□□□ 0.19
AP3S1Q92572 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 GPX1P1-201ENST00000388829 606 ntBASIC16.25■□□□□ 0.19
AP3S1Q92572 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.25■□□□□ 0.19
AP3S1Q92572 KRT18P16-201ENST00000510337 1294 ntBASIC16.25■□□□□ 0.19
AP3S1Q92572 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.25■□□□□ 0.19
AP3S1Q92572 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.25■□□□□ 0.19
AP3S1Q92572 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
AP3S1Q92572 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
AP3S1Q92572 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.25■□□□□ 0.19
AP3S1Q92572 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
AP3S1Q92572 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S1Q92572 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.24■□□□□ 0.19
AP3S1Q92572 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 AC011676.5-201ENST00000624864 2660 ntBASIC16.24■□□□□ 0.19
AP3S1Q92572 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
AP3S1Q92572 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
AP3S1Q92572 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 AC124283.5-201ENST00000624661 1809 ntBASIC16.24■□□□□ 0.19
AP3S1Q92572 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.24■□□□□ 0.19
AP3S1Q92572 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
AP3S1Q92572 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.24■□□□□ 0.19
AP3S1Q92572 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.24■□□□□ 0.19
AP3S1Q92572 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
AP3S1Q92572 AC142381.2-201ENST00000566120 298 ntBASIC16.24■□□□□ 0.19
AP3S1Q92572 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.24■□□□□ 0.19
AP3S1Q92572 RAP2CP1-201ENST00000605103 478 ntBASIC16.24■□□□□ 0.19
AP3S1Q92572 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.24■□□□□ 0.19
AP3S1Q92572 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
AP3S1Q92572 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 AL118508.1-201ENST00000613502 2345 ntBASIC16.24■□□□□ 0.19
AP3S1Q92572 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.24■□□□□ 0.19
AP3S1Q92572 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.24■□□□□ 0.19
AP3S1Q92572 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S1Q92572 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms