Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 AC112777.1-201ENST00000540175 1423 ntBASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 INTS4P1-201ENST00000438455 1935 ntBASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 LINC01521-201ENST00000504184 1943 ntBASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 AC108751.1-201ENST00000490852 363 ntBASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 AC138761.1-201ENST00000584393 385 ntBASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.35■□□□□ 0.05
CCDC168Q8NDH2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 PRSS29P-201ENST00000440800 595 ntBASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 AC087641.1-201ENST00000557561 1021 ntBASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 AC107918.4-202ENST00000641623 219 ntBASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 AC073314.1-201ENST00000568729 2216 ntBASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 RCC2P3-201ENST00000418112 1537 ntBASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 AC092865.6-201ENST00000642101 219 ntBASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC168Q8NDH2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC168Q8NDH2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.33■□□□□ 0.05
CCDC168Q8NDH2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC168Q8NDH2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC168Q8NDH2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 NKAPP1-205ENST00000585790 367 ntBASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 AC112907.3-201ENST00000577781 2400 ntBASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 AC005225.4-201ENST00000557330 545 ntBASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms