Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
AFAP1Q8N556 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC27.53■■■□□ 2
AFAP1Q8N556 DANCR-204ENST00000444958 709 ntTSL 3 BASIC27.53■■■□□ 2
AFAP1Q8N556 MTCL1P1-201ENST00000446207 792 ntBASIC27.53■■■□□ 2
AFAP1Q8N556 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC27.53■■■□□ 2
AFAP1Q8N556 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC27.53■■■□□ 2
AFAP1Q8N556 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
AFAP1Q8N556 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
AFAP1Q8N556 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
AFAP1Q8N556 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC27.52■■■□□ 2
AFAP1Q8N556 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC27.52■■■□□ 2
AFAP1Q8N556 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
AFAP1Q8N556 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC27.52■■■□□ 2
AFAP1Q8N556 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
AFAP1Q8N556 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC27.52■■■□□ 2
AFAP1Q8N556 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC27.52■■■□□ 2
AFAP1Q8N556 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
AFAP1Q8N556 AL356309.3-201ENST00000624132 1934 ntBASIC27.52■■■□□ 2
AFAP1Q8N556 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
AFAP1Q8N556 RAB17-203ENST00000409576 466 ntTSL 3 BASIC27.52■■■□□ 2
AFAP1Q8N556 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC27.52■■■□□ 2
AFAP1Q8N556 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC27.52■■■□□ 2
AFAP1Q8N556 AC004967.1-201ENST00000453589 447 ntBASIC27.52■■■□□ 2
AFAP1Q8N556 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC27.52■■■□□ 2
AFAP1Q8N556 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC27.52■■■□□ 2
AFAP1Q8N556 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC27.52■■■□□ 2
AFAP1Q8N556 AC008735.5-201ENST00000623544 497 ntBASIC27.52■■■□□ 2
AFAP1Q8N556 AC134684.3-201ENST00000641758 218 ntBASIC27.52■■■□□ 2
AFAP1Q8N556 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC27.52■■■□□ 2
AFAP1Q8N556 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
AFAP1Q8N556 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC27.52■■■□□ 2
AFAP1Q8N556 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC27.52■■■□□ 2
AFAP1Q8N556 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
AFAP1Q8N556 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
AFAP1Q8N556 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC27.51■■■□□ 2
AFAP1Q8N556 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■■□□ 2
AFAP1Q8N556 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
AFAP1Q8N556 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
AFAP1Q8N556 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
AFAP1Q8N556 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
AFAP1Q8N556 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC27.51■■□□□ 1.99
AFAP1Q8N556 MIR149-201ENST00000384879 89 ntBASIC27.51■■□□□ 1.99
AFAP1Q8N556 HNRNPA1P28-201ENST00000424481 961 ntBASIC27.51■■□□□ 1.99
AFAP1Q8N556 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC27.51■■□□□ 1.99
AFAP1Q8N556 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC27.51■■□□□ 1.99
AFAP1Q8N556 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC27.51■■□□□ 1.99
AFAP1Q8N556 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC27.51■■□□□ 1.99
AFAP1Q8N556 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC27.51■■□□□ 1.99
AFAP1Q8N556 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC27.51■■□□□ 1.99
AFAP1Q8N556 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
AFAP1Q8N556 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
AFAP1Q8N556 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
AFAP1Q8N556 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
AFAP1Q8N556 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC27.5■■□□□ 1.99
AFAP1Q8N556 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
AFAP1Q8N556 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
AFAP1Q8N556 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
AFAP1Q8N556 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC27.5■■□□□ 1.99
AFAP1Q8N556 UNC93B6-202ENST00000528242 690 ntBASIC27.5■■□□□ 1.99
AFAP1Q8N556 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC27.5■■□□□ 1.99
AFAP1Q8N556 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
AFAP1Q8N556 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC27.5■■□□□ 1.99
AFAP1Q8N556 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
AFAP1Q8N556 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
AFAP1Q8N556 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
AFAP1Q8N556 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC27.49■■□□□ 1.99
AFAP1Q8N556 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC27.49■■□□□ 1.99
AFAP1Q8N556 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
AFAP1Q8N556 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
AFAP1Q8N556 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
AFAP1Q8N556 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC27.49■■□□□ 1.99
AFAP1Q8N556 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC27.49■■□□□ 1.99
AFAP1Q8N556 AL024508.2-201ENST00000607749 1894 ntBASIC27.49■■□□□ 1.99
AFAP1Q8N556 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
AFAP1Q8N556 PMP22-202ENST00000395936 816 ntTSL 3 BASIC27.49■■□□□ 1.99
AFAP1Q8N556 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC27.49■■□□□ 1.99
AFAP1Q8N556 AC040169.1-201ENST00000565382 521 ntBASIC27.49■■□□□ 1.99
AFAP1Q8N556 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
AFAP1Q8N556 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
AFAP1Q8N556 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC27.49■■□□□ 1.99
AFAP1Q8N556 AP002414.3-201ENST00000589352 1468 ntBASIC27.49■■□□□ 1.99
AFAP1Q8N556 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
AFAP1Q8N556 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
AFAP1Q8N556 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
AFAP1Q8N556 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
AFAP1Q8N556 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
AFAP1Q8N556 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
AFAP1Q8N556 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
AFAP1Q8N556 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
AFAP1Q8N556 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC27.48■■□□□ 1.99
AFAP1Q8N556 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
AFAP1Q8N556 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
AFAP1Q8N556 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
AFAP1Q8N556 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC27.48■■□□□ 1.99
AFAP1Q8N556 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC27.48■■□□□ 1.99
AFAP1Q8N556 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC27.48■■□□□ 1.99
AFAP1Q8N556 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
AFAP1Q8N556 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
AFAP1Q8N556 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC27.48■■□□□ 1.99
AFAP1Q8N556 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms