Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.42■□□□□ 0.54
LDB1Q86U70 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
LDB1Q86U70 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.42■□□□□ 0.54
LDB1Q86U70 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.42■□□□□ 0.54
LDB1Q86U70 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.42■□□□□ 0.54
LDB1Q86U70 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 AL133373.2-201ENST00000623187 2828 ntBASIC18.41■□□□□ 0.54
LDB1Q86U70 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LDB1Q86U70 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.41■□□□□ 0.54
LDB1Q86U70 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.41■□□□□ 0.54
LDB1Q86U70 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
LDB1Q86U70 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.41■□□□□ 0.54
LDB1Q86U70 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.41■□□□□ 0.54
LDB1Q86U70 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.41■□□□□ 0.54
LDB1Q86U70 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.41■□□□□ 0.54
LDB1Q86U70 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.41■□□□□ 0.54
LDB1Q86U70 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LDB1Q86U70 AC087499.1-201ENST00000418141 1075 ntBASIC18.41■□□□□ 0.54
LDB1Q86U70 KRT18P23-201ENST00000435622 1283 ntBASIC18.41■□□□□ 0.54
LDB1Q86U70 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.41■□□□□ 0.54
LDB1Q86U70 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 AC010653.2-201ENST00000623505 997 ntBASIC18.41■□□□□ 0.54
LDB1Q86U70 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LDB1Q86U70 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 LINC01568-207ENST00000641790 1380 ntBASIC18.41■□□□□ 0.54
LDB1Q86U70 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LDB1Q86U70 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LDB1Q86U70 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
LDB1Q86U70 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LDB1Q86U70 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.4■□□□□ 0.54
LDB1Q86U70 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.4■□□□□ 0.54
LDB1Q86U70 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LDB1Q86U70 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.4■□□□□ 0.54
LDB1Q86U70 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LDB1Q86U70 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LDB1Q86U70 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LDB1Q86U70 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LDB1Q86U70 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.4■□□□□ 0.54
LDB1Q86U70 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.4■□□□□ 0.54
LDB1Q86U70 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.4■□□□□ 0.54
LDB1Q86U70 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.4■□□□□ 0.54
LDB1Q86U70 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.4■□□□□ 0.54
LDB1Q86U70 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
LDB1Q86U70 AC128688.1-201ENST00000487626 519 ntBASIC18.4■□□□□ 0.54
LDB1Q86U70 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.4■□□□□ 0.54
LDB1Q86U70 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LDB1Q86U70 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.4■□□□□ 0.54
LDB1Q86U70 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
LDB1Q86U70 WWOX-216ENST00000569818 525 ntBASIC18.4■□□□□ 0.54
LDB1Q86U70 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.4■□□□□ 0.54
LDB1Q86U70 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LDB1Q86U70 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LDB1Q86U70 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LDB1Q86U70 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LDB1Q86U70 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LDB1Q86U70 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.4■□□□□ 0.54
LDB1Q86U70 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LDB1Q86U70 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.4■□□□□ 0.54
LDB1Q86U70 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LDB1Q86U70 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.4■□□□□ 0.54
LDB1Q86U70 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.4■□□□□ 0.54
LDB1Q86U70 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.39■□□□□ 0.54
LDB1Q86U70 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LDB1Q86U70 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
LDB1Q86U70 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LDB1Q86U70 ABALON-201ENST00000629058 1903 ntBASIC18.39■□□□□ 0.53
LDB1Q86U70 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.39■□□□□ 0.53
LDB1Q86U70 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LDB1Q86U70 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LDB1Q86U70 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LDB1Q86U70 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LDB1Q86U70 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
LDB1Q86U70 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LDB1Q86U70 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.39■□□□□ 0.53
LDB1Q86U70 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.39■□□□□ 0.53
LDB1Q86U70 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.39■□□□□ 0.53
LDB1Q86U70 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.39■□□□□ 0.53
LDB1Q86U70 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LDB1Q86U70 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LDB1Q86U70 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms