Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.9■□□□□ 0.94
COL11A1P12107 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.9■□□□□ 0.94
COL11A1P12107 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
COL11A1P12107 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A1P12107 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
COL11A1P12107 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.9■□□□□ 0.94
COL11A1P12107 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.9■□□□□ 0.94
COL11A1P12107 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A1P12107 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A1P12107 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A1P12107 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.9■□□□□ 0.94
COL11A1P12107 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A1P12107 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A1P12107 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A1P12107 AC243591.1-201ENST00000452967 1364 ntBASIC20.9■□□□□ 0.94
COL11A1P12107 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
COL11A1P12107 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.9■□□□□ 0.94
COL11A1P12107 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A1P12107 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
COL11A1P12107 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A1P12107 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A1P12107 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A1P12107 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A1P12107 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.9■□□□□ 0.94
COL11A1P12107 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.9■□□□□ 0.94
COL11A1P12107 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.9■□□□□ 0.94
COL11A1P12107 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.9■□□□□ 0.94
COL11A1P12107 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.9■□□□□ 0.94
COL11A1P12107 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.9■□□□□ 0.94
COL11A1P12107 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A1P12107 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A1P12107 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.9■□□□□ 0.94
COL11A1P12107 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL11A1P12107 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL11A1P12107 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
COL11A1P12107 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A1P12107 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A1P12107 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A1P12107 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A1P12107 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A1P12107 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
COL11A1P12107 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
COL11A1P12107 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A1P12107 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
COL11A1P12107 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
COL11A1P12107 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A1P12107 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
COL11A1P12107 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A1P12107 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A1P12107 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A1P12107 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.88■□□□□ 0.93
COL11A1P12107 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A1P12107 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A1P12107 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.88■□□□□ 0.93
COL11A1P12107 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A1P12107 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A1P12107 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A1P12107 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A1P12107 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.88■□□□□ 0.93
COL11A1P12107 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
COL11A1P12107 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.88■□□□□ 0.93
COL11A1P12107 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
COL11A1P12107 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
COL11A1P12107 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
COL11A1P12107 IL9RP2-201ENST00000423948 1312 ntBASIC20.88■□□□□ 0.93
COL11A1P12107 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A1P12107 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A1P12107 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A1P12107 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
COL11A1P12107 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A1P12107 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.88■□□□□ 0.93
COL11A1P12107 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A1P12107 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A1P12107 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A1P12107 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A1P12107 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A1P12107 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
COL11A1P12107 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.88■□□□□ 0.93
COL11A1P12107 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A1P12107 KRT18P67-201ENST00000432816 1264 ntBASIC20.88■□□□□ 0.93
COL11A1P12107 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.88■□□□□ 0.93
COL11A1P12107 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.88■□□□□ 0.93
COL11A1P12107 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.88■□□□□ 0.93
COL11A1P12107 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.88■□□□□ 0.93
COL11A1P12107 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.88■□□□□ 0.93
COL11A1P12107 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
COL11A1P12107 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A1P12107 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A1P12107 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.87■□□□□ 0.93
COL11A1P12107 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
COL11A1P12107 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A1P12107 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A1P12107 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A1P12107 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A1P12107 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A1P12107 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.87■□□□□ 0.93
COL11A1P12107 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A1P12107 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.87■□□□□ 0.93
COL11A1P12107 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.87■□□□□ 0.93
COL11A1P12107 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms