Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CSPG5O95196 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG5O95196 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CSPG5O95196 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG5O95196 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.78■□□□□ 0.76
CSPG5O95196 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG5O95196 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.78■□□□□ 0.76
CSPG5O95196 NSUN5P1-202ENST00000421140 1535 ntBASIC19.78■□□□□ 0.76
CSPG5O95196 NSUN5P2-203ENST00000457352 1529 ntBASIC19.78■□□□□ 0.76
CSPG5O95196 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CSPG5O95196 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CSPG5O95196 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG5O95196 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG5O95196 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CSPG5O95196 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.78■□□□□ 0.76
CSPG5O95196 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.78■□□□□ 0.76
CSPG5O95196 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.78■□□□□ 0.76
CSPG5O95196 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.78■□□□□ 0.76
CSPG5O95196 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.78■□□□□ 0.76
CSPG5O95196 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.78■□□□□ 0.76
CSPG5O95196 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.78■□□□□ 0.76
CSPG5O95196 AP005901.3-202ENST00000581653 237 ntBASIC19.78■□□□□ 0.76
CSPG5O95196 GPR32P1-201ENST00000601788 811 ntBASIC19.78■□□□□ 0.76
CSPG5O95196 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG5O95196 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG5O95196 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.78■□□□□ 0.76
CSPG5O95196 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG5O95196 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG5O95196 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG5O95196 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG5O95196 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.78■□□□□ 0.76
CSPG5O95196 AL109659.2-201ENST00000606809 1674 ntBASIC19.78■□□□□ 0.76
CSPG5O95196 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG5O95196 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG5O95196 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG5O95196 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.77■□□□□ 0.76
CSPG5O95196 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.77■□□□□ 0.76
CSPG5O95196 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG5O95196 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG5O95196 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.77■□□□□ 0.76
CSPG5O95196 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG5O95196 MIR940-201ENST00000401276 94 ntBASIC19.77■□□□□ 0.76
CSPG5O95196 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG5O95196 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.77■□□□□ 0.76
CSPG5O95196 MINOS1P3-201ENST00000457048 203 ntBASIC19.77■□□□□ 0.76
CSPG5O95196 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG5O95196 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.77■□□□□ 0.76
CSPG5O95196 AC139530.3-201ENST00000620344 690 ntBASIC19.77■□□□□ 0.76
CSPG5O95196 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CSPG5O95196 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG5O95196 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CSPG5O95196 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG5O95196 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG5O95196 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.77■□□□□ 0.76
CSPG5O95196 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CSPG5O95196 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.77■□□□□ 0.75
CSPG5O95196 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CSPG5O95196 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.77■□□□□ 0.75
CSPG5O95196 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSPG5O95196 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.76■□□□□ 0.75
CSPG5O95196 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.76■□□□□ 0.75
CSPG5O95196 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.76■□□□□ 0.75
CSPG5O95196 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.76■□□□□ 0.75
CSPG5O95196 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSPG5O95196 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSPG5O95196 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSPG5O95196 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSPG5O95196 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CSPG5O95196 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSPG5O95196 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.76■□□□□ 0.75
CSPG5O95196 AF238378.1-201ENST00000526806 358 ntBASIC19.76■□□□□ 0.75
CSPG5O95196 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.76■□□□□ 0.75
CSPG5O95196 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.76■□□□□ 0.75
CSPG5O95196 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSPG5O95196 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSPG5O95196 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.76■□□□□ 0.75
CSPG5O95196 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSPG5O95196 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CSPG5O95196 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.76■□□□□ 0.75
CSPG5O95196 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.76■□□□□ 0.75
CSPG5O95196 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CSPG5O95196 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSPG5O95196 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSPG5O95196 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSPG5O95196 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSPG5O95196 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSPG5O95196 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSPG5O95196 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSPG5O95196 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSPG5O95196 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSPG5O95196 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.75■□□□□ 0.75
CSPG5O95196 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.75■□□□□ 0.75
CSPG5O95196 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CSPG5O95196 KRT18P13-201ENST00000400056 1290 ntBASIC19.75■□□□□ 0.75
CSPG5O95196 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CSPG5O95196 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
CSPG5O95196 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.75■□□□□ 0.75
CSPG5O95196 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSPG5O95196 SAPCD2P3-201ENST00000455031 850 ntBASIC19.75■□□□□ 0.75
CSPG5O95196 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms