Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 UPF3AP3-201ENST00000420996 769 ntBASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 AL138831.2-201ENST00000606564 490 ntBASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 LINC01521-201ENST00000504184 1943 ntBASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC163A0A0D9SF12 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.21■□□□□ 0.5
CCDC163A0A0D9SF12 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 HLA-J-201ENST00000462773 1622 ntBASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 AC021087.4-201ENST00000563761 564 ntBASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 AL691403.2-201ENST00000618460 490 ntBASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 AC009154.2-201ENST00000621177 724 ntBASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC163A0A0D9SF12 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 ABCD1P5-201ENST00000445663 754 ntBASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 AC104109.2-201ENST00000602919 1418 ntBASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC163A0A0D9SF12 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms