Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 FAM201B-201ENST00000458407 597 ntBASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 AL357033.4-201ENST00000617703 1807 ntBASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 AL354751.1-201ENST00000412768 1863 ntBASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 ABALON-201ENST00000629058 1903 ntBASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 AC126763.1-201ENST00000552015 2118 ntBASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 AC012313.1-201ENST00000593393 3059 ntBASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 RCC2P3-201ENST00000418112 1537 ntBASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV30A0A087WSZ9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TRAV30A0A087WSZ9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TRAV30A0A087WSZ9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TRAV30A0A087WSZ9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV30A0A087WSZ9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV30A0A087WSZ9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV30A0A087WSZ9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV30A0A087WSZ9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV30A0A087WSZ9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV30A0A087WSZ9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV30A0A087WSZ9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 B3GAT3P1-201ENST00000471720 806 ntBASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 AP000692.2-201ENST00000608391 879 ntBASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 AP001412.1-201ENST00000608405 714 ntBASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TRAV30A0A087WSZ9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms