Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
TRBV20-1A0A075B6N2 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
TRBV20-1A0A075B6N2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.33□□□□□ -0.43
TRBV20-1A0A075B6N2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
TRBV20-1A0A075B6N2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 AC004987.1-201ENST00000428627 508 ntBASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 AL033527.3-201ENST00000566366 1196 ntBASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 GRAMD4P7-201ENST00000578182 1232 ntBASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 PCDHA14-201ENST00000506751 2298 ntBASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV20-1A0A075B6N2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 AP005435.1-201ENST00000529293 1178 ntBASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 AC053503.5-201ENST00000601508 636 ntBASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.32□□□□□ -0.44
TRBV20-1A0A075B6N2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms