Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 TSSC2-201ENST00000450217 709 ntBASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 AC092329.2-201ENST00000598402 547 ntBASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 BX276092.5-203ENST00000456199 560 ntBASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 AL121672.3-201ENST00000608644 468 ntBASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 LETM1P2-201ENST00000597330 2178 ntBASIC20.85■□□□□ 0.93
HDAC6Q9UBN7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDAC6Q9UBN7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 TEX21P-204ENST00000641479 1693 ntBASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 HLA-F-220ENST00000434407 884 ntBASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 AP002383.4-201ENST00000442518 975 ntBASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 MIR3652-201ENST00000579335 131 ntBASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 MIR3180-1-201ENST00000580374 94 ntBASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 MIR3180-3-201ENST00000584616 94 ntBASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 AL691432.3-201ENST00000621860 400 ntBASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDAC6Q9UBN7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
HDAC6Q9UBN7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
HDAC6Q9UBN7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
HDAC6Q9UBN7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.83■□□□□ 0.92
HDAC6Q9UBN7 AL162741.1-201ENST00000565563 1558 ntBASIC20.83■□□□□ 0.92
HDAC6Q9UBN7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HDAC6Q9UBN7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HDAC6Q9UBN7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.83■□□□□ 0.92
HDAC6Q9UBN7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HDAC6Q9UBN7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms