Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC22.41■■□□□ 1.18
RTFDC1Q9BY42 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC22.41■■□□□ 1.18
RTFDC1Q9BY42 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RTFDC1Q9BY42 FAM215A-202ENST00000632077 792 ntBASIC22.41■■□□□ 1.18
RTFDC1Q9BY42 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
RTFDC1Q9BY42 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTFDC1Q9BY42 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTFDC1Q9BY42 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC22.41■■□□□ 1.18
RTFDC1Q9BY42 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
RTFDC1Q9BY42 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTFDC1Q9BY42 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 AC007952.6-201ENST00000573168 2673 ntBASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 AC003957.1-201ENST00000625108 2673 ntBASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 RBM17P3-201ENST00000417687 1192 ntBASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 THAP5-204ENST00000438865 868 ntTSL 2 BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 AC139887.3-201ENST00000568585 713 ntBASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 LITAF-211ENST00000572255 516 ntTSL 4 BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
RTFDC1Q9BY42 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RTFDC1Q9BY42 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.39■■□□□ 1.18
RTFDC1Q9BY42 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RTFDC1Q9BY42 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTFDC1Q9BY42 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
RTFDC1Q9BY42 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTFDC1Q9BY42 SCARNA2-201ENST00000458748 420 ntBASIC22.39■■□□□ 1.17
RTFDC1Q9BY42 POLD2P1-201ENST00000511220 997 ntBASIC22.39■■□□□ 1.17
RTFDC1Q9BY42 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RTFDC1Q9BY42 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTFDC1Q9BY42 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RTFDC1Q9BY42 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC22.39■■□□□ 1.17
RTFDC1Q9BY42 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
RTFDC1Q9BY42 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.39■■□□□ 1.17
RTFDC1Q9BY42 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC22.39■■□□□ 1.17
RTFDC1Q9BY42 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTFDC1Q9BY42 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTFDC1Q9BY42 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
RTFDC1Q9BY42 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.39■■□□□ 1.17
RTFDC1Q9BY42 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RTFDC1Q9BY42 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 HNRNPDP1-201ENST00000439535 754 ntBASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 RPL13AP23-201ENST00000480739 586 ntBASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 PRKN-208ENST00000610470 531 ntTSL 2 BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 PRKN-209ENST00000612485 225 ntTSL 5 BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 TP73-AS1-210ENST00000637775 1455 ntBASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTFDC1Q9BY42 PMS2P7-201ENST00000506558 1336 ntBASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 FABP5-202ENST00000396359 986 ntTSL 5 BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 COX10-202ENST00000429152 875 ntTSL 2 BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 AC068472.1-201ENST00000474589 881 ntBASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 PIN1-206ENST00000587625 878 ntTSL 2 BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTFDC1Q9BY42 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms